Difference between revisions of "CHC T00009019001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16393 RXN-16393] == * direction: ** LEFT-TO-RIGHT * common name: ** long-chain-fatty-acid-CoA l...")
 
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16393 RXN-16393] ==
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== Gene CHC_T00009019001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 97869
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* common name:
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* transcription direction:
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** long-chain-fatty-acid-CoA ligase
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** POSITIVE
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* ec number:
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* right end position:
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** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
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** 99044
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* centisome position:
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** 45.70349   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[2.1.1.79-RXN]]
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** 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''+''' 1 [[DODECANOATE]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[LAUROYLCOA-CPD]][c] '''+''' 1 [[PPI]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 ATP[c] '''+''' 1 coenzyme A[c] '''+''' 1 laurate[c] '''=>''' 1 AMP[c] '''+''' 1 lauroyl-CoA[c] '''+''' 1 diphosphate[c]
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* Reaction: [[RXN-7421]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN1G-2544]]
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* [[CHC_T00008160001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** Assignment: automated-name-match
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* [[CHC_T00009428001_1]]
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* Reaction: [[RXN1G-3641]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00008811001_1]]
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*** Assignment: automated-name-match
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways associated ==
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* [[CHC_T00009428001]]
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* [[PWY0-541]]
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** ORIGINAL_GENOME
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* [[PWY-4942]]
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***AUTOMATED-NAME-MATCH
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* [[PWYG-321]]
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* [[CHC_T00008500001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008811001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=97869}}
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{{#set: common name=long-chain-fatty-acid-CoA ligase}}
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{{#set: transcription direction=POSITIVE}}
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{{#set: ec number=EC-6.2.1.3}}
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{{#set: right end position=99044}}
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{{#set: gene associated=CHC_T00008160001_1|CHC_T00009428001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00008500001_1|CHC_T00008811001}}
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{{#set: centisome position=45.70349    }}
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{{#set: in pathway=PWY-5971}}
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{{#set: reaction associated=2.1.1.79-RXN|RXN-7421|RXN1G-2544|RXN1G-3641}}
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{{#set: reconstruction category=orthology}}
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{{#set: pathway associated=PWY0-541|PWY-4942|PWYG-321}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 17:04, 9 January 2019

Gene CHC_T00009019001

  • left end position:
    • 97869
  • transcription direction:
    • POSITIVE
  • right end position:
    • 99044
  • centisome position:
    • 45.70349
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009019001&oldid=22657"