Difference between revisions of "CHC T00008759001"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] == * direction: ** LEFT-TO-RIGHT * common name: ** L-asparaginyl-tRNAasn hydro...")
 
 
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12460 RXN-12460] ==
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== Gene CHC_T00008759001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 122323
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* common name:
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* transcription direction:
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** L-asparaginyl-tRNAasn hydrolase
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** NEGATIVE
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** Peptidyl-tRNA hydrolase 2, mitochondrial
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* right end position:
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* ec number:
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** 123081
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** [http://enzyme.expasy.org/EC/3.1.1.29 EC-3.1.1.29]
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* centisome position:
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** 83.27921   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* Reaction: [[1.10.2.2-RXN]]
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** 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ASN-tRNAs]][c] '''+''' 1 [[ASN]][c]
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** Source: [[annotation-original_genome]]
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* With common name(s):
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*** Assignment: automated-name-match
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** 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 tRNAasn[c] '''+''' 1 L-asparagine[c]
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* Reaction: [[RXN-14107]]
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** Source: [[annotation-original_genome]]
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== Genes associated with this reaction  ==
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*** Assignment: automated-name-match
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Genes have been associated with this reaction based on different elements listed below.
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* Reaction: [[RXN-15816]]
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* [[CHC_T00006238001_1]]
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** Source: [[annotation-original_genome]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** Assignment: automated-name-match
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* [[CHC_T00008495001_1]]
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* Reaction: [[RXN-15829]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** Source: [[annotation-original_genome]]
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* [[CHC_T00008495001]]
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*** Assignment: automated-name-match
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** ORIGINAL_GENOME
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== Pathways associated ==
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***AUTOMATED-NAME-MATCH
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* [[PWY-3781]]
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== Pathways  ==
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* [[PWY-7279]]
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* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
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* [[PWY-7082]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6692]]
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: left end position=122323}}
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{{#set: common name=L-asparaginyl-tRNAasn hydrolase}}
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{{#set: transcription direction=NEGATIVE}}
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{{#set: common name=Peptidyl-tRNA hydrolase 2, mitochondrial}}
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{{#set: right end position=123081}}
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{{#set: ec number=EC-3.1.1.29}}
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{{#set: centisome position=83.27921    }}
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{{#set: gene associated=CHC_T00006238001_1|CHC_T00008495001_1|CHC_T00008495001}}
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{{#set: reaction associated=1.10.2.2-RXN|RXN-14107|RXN-15816|RXN-15829}}
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{{#set: in pathway=PWY490-4}}
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{{#set: pathway associated=PWY-3781|PWY-7279|PWY-7082|PWY-6692}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Latest revision as of 17:04, 9 January 2019

Gene CHC_T00008759001

  • left end position:
    • 122323
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 123081
  • centisome position:
    • 83.27921
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008759001&oldid=22667"