Difference between revisions of "6.3.5.6-RXN"

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(Created page with "Category:Gene == Gene CHC_T00008326001 == * left end position: ** 73329 * transcription direction: ** POSITIVE * right end position: ** 74786 * centisome position: ** 60.6...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008326001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=6.3.5.6-RXN 6.3.5.6-RXN] ==
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* left end position:
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* direction:
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** 73329
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** LEFT-TO-RIGHT
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* transcription direction:
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* ec number:
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** POSITIVE
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** [http://enzyme.expasy.org/EC/6.3.5.6 EC-6.3.5.6]
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* right end position:
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** 74786
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* centisome position:
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** 60.690754   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[SERINE-C-PALMITOYLTRANSFERASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[L-aspartyl-tRNAAsn]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Charged-ASN-tRNAs]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 H2O[c] '''+''' 1 ATP[c] '''+''' 1 an L-aspartyl-[tRNAAsn][c] '''+''' 1 L-glutamine[c] '''=>''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 an L-asparaginyl-[tRNAasn][c] '''+''' 1 L-glutamate[c] '''+''' 1 H+[c]
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* [[PWY-5129]]
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* [[PWY3DJ-12]]
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== Genes associated with this reaction  ==
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* [[SPHINGOLIPID-SYN-PWY]]
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009018001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00000761001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008942001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways ==
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* [[PWY490-4]], L-asparagine biosynthesis III (tRNA-dependent): [http://metacyc.org/META/NEW-IMAGE?object=PWY490-4 PWY490-4]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=73329}}
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* RHEA:
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{{#set: transcription direction=POSITIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14513 14513]
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{{#set: right end position=74786}}
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* LIGAND-RXN:
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{{#set: centisome position=60.690754    }}
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** [http://www.genome.jp/dbget-bin/www_bget?R04212 R04212]
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{{#set: reaction associated=SERINE-C-PALMITOYLTRANSFERASE-RXN}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: pathway associated=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
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{{#set: ec number=EC-6.3.5.6}}
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{{#set: gene associated=CHC_T00009018001_1|CHC_T00000761001_1|CHC_T00008942001_1}}
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{{#set: in pathway=PWY490-4}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 18:14, 9 January 2019

Reaction 6.3.5.6-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 ATP[c] + 1 an L-aspartyl-[tRNAAsn][c] + 1 L-glutamine[c] => 1 phosphate[c] + 1 ADP[c] + 1 an L-asparaginyl-[tRNAasn][c] + 1 L-glutamate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY490-4, L-asparagine biosynthesis III (tRNA-dependent): PWY490-4
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




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