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| − | [[Category:Reaction]] | + | [[Category:Metabolite]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALANINE--TRNA-LIGASE-RXN ALANINE--TRNA-LIGASE-RXN] == | + | == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Lipopolysaccharides Lipopolysaccharides] == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| | * common name: | | * common name: |
| − | ** Alanine--tRNA ligase | + | ** a lipopolysaccharide |
| − | ** alanine--tRNA ligase (chloroplast)
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/6.1.1.7 EC-6.1.1.7]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | + | ** a lipopolysaccharide |
| | + | ** lipopolysaccharide |
| | + | ** LPS |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) known to consume the compound == |
| − | * With identifiers:
| + | * [[2.4.1.56-RXN]] |
| − | ** 1 [[ALA-tRNAs]][c] '''+''' 1 [[L-ALPHA-ALANINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Charged-ALA-tRNAs]][c]
| + | == Reaction(s) known to produce the compound == |
| − | * With common name(s):
| + | == Reaction(s) of unknown directionality == |
| − | ** 1 a tRNAala[c] '''+''' 1 L-alanine[c] '''+''' 1 H+[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 H+[c] '''+''' 1 an L-alanyl-[tRNAala][c] | + | |
| − | | + | |
| − | == Genes associated with this reaction ==
| + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00008489001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00009548001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00008489001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | == Pathways == | + | |
| − | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
| + | |
| − | ** '''21''' reactions found over '''21''' reactions in the full pathway
| + | |
| − | == Reconstruction information == | + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: common name=a lipopolysaccharide}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12540 12540]
| + | {{#set: common name=a lipopolysaccharide|lipopolysaccharide|LPS}} |
| − | * LIGAND-RXN:
| + | {{#set: consumed by=2.4.1.56-RXN}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R03038 R03038]
| + | |
| − | * UNIPROT:
| + | |
| − | ** [http://www.uniprot.org/uniprot/P56452 P56452]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O27718 O27718]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O34526 O34526]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P47534 P47534]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O58035 O58035]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9PI05 Q9PI05]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9JTG4 Q9JTG4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q57984 Q57984]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O51238 O51238]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9CEW0 Q9CEW0]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O83980 O83980]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9X1B6 Q9X1B6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZJY5 Q9ZJY5]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O67323 O67323]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9ZCA4 Q9ZCA4]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9Z714 Q9Z714]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P49588 P49588]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P43815 P43815]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P50475 P50475]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P24075 P24075]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P27866 P27866]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P35029 P35029]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P40825 P40825]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P75368 P75368]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q48976 Q48976]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P00957 P00957]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P21894 P21894]
| + | |
| − | ** [http://www.uniprot.org/uniprot/O50189 O50189]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}}
| + | |
| − | {{#set: common name=Alanine--tRNA ligase}} | + | |
| − | {{#set: common name=alanine--tRNA ligase (chloroplast)}} | + | |
| − | {{#set: ec number=EC-6.1.1.7}} | + | |
| − | {{#set: gene associated=CHC_T00008489001|CHC_T00009548001|CHC_T00008489001_1}}
| + | |
| − | {{#set: in pathway=TRNA-CHARGING-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
