Difference between revisions of "RXN-9518"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18778 CPD-18778] == * smiles: ** COC1(=C(NCC([O-])=O)CC(CO)(O)CC(=NC(C([O-])=O)CO)1) * comm...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-18778 CPD-18778] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9518 RXN-9518] ==
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* smiles:
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* direction:
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** COC1(=C(NCC([O-])=O)CC(CO)(O)CC(=NC(C([O-])=O)CO)1)
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** LEFT-TO-RIGHT
 
* common name:
 
* common name:
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** shinorine
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** 3-hydroxyhexanoyl-[acyl-carrier protein] reductase
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* inchi key:
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** 3-oxoacyl-[acyl-carrier-protein] reductase
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** InChIKey=WXEQFJUHQIGKNG-MZNRBSSJSA-L
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** 3-oxoacyl-(acyl-carrier-protein) reductase
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* molecular weight:
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** beta-ketoacyl reductase
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** 330.294   
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* ec number:
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** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
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** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
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** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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== Reaction(s) of unknown directionality ==
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** 1 [[NADPH]][c] '''+''' 1 [[3-oxo-hexanoyl-ACPs]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[R-3-hydroxyhexanoyl-ACPs]][c]
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* [[RXN-17371]]
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* With common name(s):
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** 1 NADPH[c] '''+''' 1 a 3-oxo-hexanoyl-[acp][c] '''+''' 1 H+[c] '''=>''' 1 NADP+[c] '''+''' 1 a (3R)-3-hydroxyhexanoyl-[acp][c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008557001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008517001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00008496001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00008477001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways  ==
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* [[PWY-5994]], palmitate biosynthesis I (animals and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5994 PWY-5994]
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** '''22''' reactions found over '''31''' reactions in the full pathway
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* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
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** '''31''' reactions found over '''31''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: smiles=COC1(=C(NCC([O-])=O)CC(CO)(O)CC(=NC(C([O-])=O)CO)1)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=shinorine}}
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{{#set: common name=3-hydroxyhexanoyl-[acyl-carrier protein] reductase}}
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{{#set: inchi key=InChIKey=WXEQFJUHQIGKNG-MZNRBSSJSA-L}}
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{{#set: common name=3-oxoacyl-[acyl-carrier-protein] reductase}}
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{{#set: molecular weight=330.294    }}
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{{#set: common name=3-oxoacyl-(acyl-carrier-protein) reductase}}
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{{#set: consumed or produced by=RXN-17371}}
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{{#set: common name=beta-ketoacyl reductase}}
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{{#set: ec number=EC-2.3.1.86}}
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{{#set: ec number=EC-2.3.1.85}}
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{{#set: ec number=EC-1.1.1.100}}
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{{#set: gene associated=CHC_T00008557001|CHC_T00008517001_1|CHC_T00008496001|CHC_T00008477001}}
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{{#set: in pathway=PWY-5994|PWY-5971}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:22, 9 January 2019

Reaction RXN-9518

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • 3-hydroxyhexanoyl-[acyl-carrier protein] reductase
    • 3-oxoacyl-[acyl-carrier-protein] reductase
    • 3-oxoacyl-(acyl-carrier-protein) reductase
    • beta-ketoacyl reductase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 22 reactions found over 31 reactions in the full pathway
  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-hydroxyhexanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.
"3-oxoacyl-[acyl-carrier-protein] reductase" cannot be used as a page name in this wiki.






Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-9518&oldid=23014"