Difference between revisions of "3.4.19.12-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expa...")
 
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ADENYL-KIN-RXN ADENYL-KIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.4.19.12-RXN 3.4.19.12-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.4.3 EC-2.7.4.3]
+
** [http://enzyme.expasy.org/EC/3.4.19.12 EC-3.4.19.12]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[AMP]][c] '''=>''' 2 [[ADP]][c]
+
** 1 [[PROTEIN-N-UBIQUITYL-LYSINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Ubiquitin-C-Terminal-Glycine]][c] '''+''' 1 [[Protein-L-lysine]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 AMP[c] '''=>''' 2 ADP[c]
+
** 1 an N6-monoubiquitinyl-[protein]-L-lysine[c] '''+''' 1 H2O[c] '''=>''' 1 a [ubiquitin] C-terminal glycine[c] '''+''' 1 a [protein]-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00006303001_1]]
+
* Gene: [[CHC_T00004996001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
* Gene: [[CHC_T00005609001_1]]
−
* [[CHC_T00000884001_1]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
* Gene: [[CHC_T00007357001_1]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00001665001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00005836001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00003069001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00007146001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00004011001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00002764001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008803001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00005132001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7219]], adenosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7219 PWY-7219]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[annotation]]:
+
*** Tool: [[pantograph]]
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12973 12973]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00127 R00127]
+
** [http://www.genome.jp/dbget-bin/www_bget?R02418 R02418]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P05081 P05081]
+
−
** [http://www.uniprot.org/uniprot/P20425 P20425]
+
−
** [http://www.uniprot.org/uniprot/P08166 P08166]
+
−
** [http://www.uniprot.org/uniprot/P38372 P38372]
+
−
** [http://www.uniprot.org/uniprot/O27699 O27699]
+
−
** [http://www.uniprot.org/uniprot/O29581 O29581]
+
−
** [http://www.uniprot.org/uniprot/O59443 O59443]
+
−
** [http://www.uniprot.org/uniprot/Q9YDD2 Q9YDD2]
+
−
** [http://www.uniprot.org/uniprot/Q9UZN1 Q9UZN1]
+
−
** [http://www.uniprot.org/uniprot/P58117 P58117]
+
−
** [http://www.uniprot.org/uniprot/Q9PHM8 Q9PHM8]
+
−
** [http://www.uniprot.org/uniprot/P54819 P54819]
+
−
** [http://www.uniprot.org/uniprot/O66490 O66490]
+
−
** [http://www.uniprot.org/uniprot/Q9V1V9 Q9V1V9]
+
−
** [http://www.uniprot.org/uniprot/P49973 P49973]
+
−
** [http://www.uniprot.org/uniprot/P24323 P24323]
+
−
** [http://www.uniprot.org/uniprot/P47417 P47417]
+
−
** [http://www.uniprot.org/uniprot/Q9HPA7 Q9HPA7]
+
−
** [http://www.uniprot.org/uniprot/P29410 P29410]
+
−
** [http://www.uniprot.org/uniprot/P16304 P16304]
+
−
** [http://www.uniprot.org/uniprot/P00570 P00570]
+
−
** [http://www.uniprot.org/uniprot/P27142 P27142]
+
−
** [http://www.uniprot.org/uniprot/P07170 P07170]
+
−
** [http://www.uniprot.org/uniprot/P12115 P12115]
+
−
** [http://www.uniprot.org/uniprot/P69441 P69441]
+
−
** [http://www.uniprot.org/uniprot/P00568 P00568]
+
−
** [http://www.uniprot.org/uniprot/P10772 P10772]
+
−
** [http://www.uniprot.org/uniprot/P00571 P00571]
+
−
** [http://www.uniprot.org/uniprot/P00569 P00569]
+
−
** [http://www.uniprot.org/uniprot/P10251 P10251]
+
−
** [http://www.uniprot.org/uniprot/P43417 P43417]
+
−
** [http://www.uniprot.org/uniprot/P49974 P49974]
+
−
** [http://www.uniprot.org/uniprot/P33107 P33107]
+
−
** [http://www.uniprot.org/uniprot/P27143 P27143]
+
−
** [http://www.uniprot.org/uniprot/P26364 P26364]
+
−
** [http://www.uniprot.org/uniprot/P33075 P33075]
+
−
** [http://www.uniprot.org/uniprot/P35140 P35140]
+
−
** [http://www.uniprot.org/uniprot/P35141 P35141]
+
−
** [http://www.uniprot.org/uniprot/P39068 P39068]
+
−
** [http://www.uniprot.org/uniprot/P34346 P34346]
+
−
** [http://www.uniprot.org/uniprot/P43188 P43188]
+
−
** [http://www.uniprot.org/uniprot/P69344 P69344]
+
−
** [http://www.uniprot.org/uniprot/P0A0U6 P0A0U6]
+
−
** [http://www.uniprot.org/uniprot/P49979 P49979]
+
−
** [http://www.uniprot.org/uniprot/Q50299 Q50299]
+
−
** [http://www.uniprot.org/uniprot/P43412 P43412]
+
−
** [http://www.uniprot.org/uniprot/P72641 P72641]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.7.4.3}}
+
{{#set: ec number=EC-3.4.19.12}}
−
{{#set: gene associated=CHC_T00006303001_1|CHC_T00000884001_1}}
+
{{#set: gene associated=CHC_T00004996001_1|CHC_T00005609001_1|CHC_T00007357001_1|CHC_T00001665001_1|CHC_T00005836001_1|CHC_T00003069001_1|CHC_T00007146001_1|CHC_T00004011001_1|CHC_T00002764001_1|CHC_T00008803001_1|CHC_T00005132001_1}}
−
{{#set: in pathway=PWY-7219}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 17:23, 9 January 2019

Reaction 3.4.19.12-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




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