Difference between revisions of "RXN-1126"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11529 CPD-11529] == * smiles: ** CCC=CCC4(C(=O)CCC(CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(O...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11529 CPD-11529] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-1126 RXN-1126] ==
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* smiles:
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* direction:
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** CCC=CCC4(C(=O)CCC(CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)
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** LEFT-TO-RIGHT
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* inchi key:
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* ec number:
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** InChIKey=WQKKCPPNDKSAIU-PCDAEQFSSA-J
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** [http://enzyme.expasy.org/EC/6.2.1.12 EC-6.2.1.12]
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* common name:
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** jasmonoyl-CoA
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* molecular weight:
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** 955.76   
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-10701]]
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** 1 [[ATP]][c] '''+''' 1 [[CPD-676]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[CAFFEOYL-COA]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 ATP[c] '''+''' 1 trans-caffeate[c] '''+''' 1 coenzyme A[c] '''=>''' 1 trans-caffeoyl-CoA[c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008160001_1]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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* Gene: [[CHC_T00008472001_1]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121]
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** '''8''' reactions found over '''19''' reactions in the full pathway
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* [[PWY-7398]], coumarins biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7398 PWY-7398]
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** '''3''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-6673]], caffeoylglucarate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6673 PWY-6673]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44237154 44237154]
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** [http://www.genome.jp/dbget-bin/www_bget?R01943 R01943]
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{{#set: smiles=CCC=CCC4(C(=O)CCC(CC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)}}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: inchi key=InChIKey=WQKKCPPNDKSAIU-PCDAEQFSSA-J}}
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{{#set: ec number=EC-6.2.1.12}}
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{{#set: common name=jasmonoyl-CoA}}
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{{#set: gene associated=CHC_T00008160001_1|CHC_T00008472001_1}}
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{{#set: molecular weight=955.76    }}
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{{#set: in pathway=PWY-1121|PWY-7398|PWY-6673}}
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{{#set: produced by=RXN-10701}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 18:24, 9 January 2019

Reaction RXN-1126

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 ATP[c] + 1 trans-caffeate[c] + 1 coenzyme A[c] => 1 trans-caffeoyl-CoA[c] + 1 AMP[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-1121, suberin monomers biosynthesis: PWY-1121
    • 8 reactions found over 19 reactions in the full pathway
  • PWY-7398, coumarins biosynthesis (engineered): PWY-7398
    • 3 reactions found over 13 reactions in the full pathway
  • PWY-6673, caffeoylglucarate biosynthesis: PWY-6673
    • 1 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-1126&oldid=23054"