Difference between revisions of "TYROSINE--TRNA-LIGASE-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7037 CPD-7037] == * smiles: ** CSCCCO * inchi key: ** InChIKey=CZUGFKJYCPYHHV-UHFFFAOYSA-N...")
 
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7037 CPD-7037] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE--TRNA-LIGASE-RXN TYROSINE--TRNA-LIGASE-RXN] ==
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* smiles:
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* direction:
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** CSCCCO
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** LEFT-TO-RIGHT
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* inchi key:
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** InChIKey=CZUGFKJYCPYHHV-UHFFFAOYSA-N
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* common name:
 
* common name:
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** methionol
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** Putative Tyrosyl-tRNA synthetase
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* molecular weight:
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* ec number:
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** 106.182   
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** [http://enzyme.expasy.org/EC/6.1.1.1 EC-6.1.1.1]
 
* Synonym(s):
 
* Synonym(s):
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** methylmercaptopropanol
 
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** 3-methylthiopropanol
 
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** 3-methylmercapto-1-propanol
 
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** 3-hydroxypropyl methyl sulfide
 
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** γ-methylmercaptopropyl alcohol
 
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** 3-methylsulfanyl-1-propanol
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[RXN-7706]]
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** 1 [[TYR-tRNAs]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[TYR]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[Charged-TYR-tRNAs]][c] '''+''' 1 [[AMP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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** 1 a tRNAtyr[c] '''+''' 1 ATP[c] '''+''' 1 L-tyrosine[c] '''=>''' 1 diphosphate[c] '''+''' 1 an L-tyrosyl-[tRNAtyr][c] '''+''' 1 AMP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009128001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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* Gene: [[CHC_T00009345001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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* Gene: [[CHC_T00009345001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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== Pathways  ==
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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* PUBCHEM:
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* RHEA:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=10448 10448]
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10220 10220]
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* CHEMSPIDER:
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* UNIPROT:
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** [http://www.chemspider.com/Chemical-Structure.10016.html 10016]
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** [http://www.uniprot.org/uniprot/P28669 P28669]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P22326 P22326]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=49019 49019]
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** [http://www.uniprot.org/uniprot/P36421 P36421]
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* METABOLIGHTS : MTBLC49019
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** [http://www.uniprot.org/uniprot/P41256 P41256]
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* HMDB : HMDB31716
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** [http://www.uniprot.org/uniprot/O51343 O51343]
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{{#set: smiles=CSCCCO}}
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** [http://www.uniprot.org/uniprot/Q9PN27 Q9PN27]
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{{#set: inchi key=InChIKey=CZUGFKJYCPYHHV-UHFFFAOYSA-N}}
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** [http://www.uniprot.org/uniprot/Q9CIH5 Q9CIH5]
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{{#set: common name=methionol}}
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** [http://www.uniprot.org/uniprot/Q9ZL69 Q9ZL69]
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{{#set: molecular weight=106.182    }}
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** [http://www.uniprot.org/uniprot/P47693 P47693]
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{{#set: common name=methylmercaptopropanol|3-methylthiopropanol|3-methylmercapto-1-propanol|3-hydroxypropyl methyl sulfide|γ-methylmercaptopropyl alcohol|3-methylsulfanyl-1-propanol}}
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** [http://www.uniprot.org/uniprot/Q9ZCZ4 Q9ZCZ4]
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{{#set: produced by=RXN-7706}}
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** [http://www.uniprot.org/uniprot/P43836 P43836]
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** [http://www.uniprot.org/uniprot/O83806 O83806]
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** [http://www.uniprot.org/uniprot/Q57834 Q57834]
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** [http://www.uniprot.org/uniprot/P56417 P56417]
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** [http://www.uniprot.org/uniprot/O67632 O67632]
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** [http://www.uniprot.org/uniprot/O58739 O58739]
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** [http://www.uniprot.org/uniprot/Q9WYU8 Q9WYU8]
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** [http://www.uniprot.org/uniprot/O27795 O27795]
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** [http://www.uniprot.org/uniprot/O84065 O84065]
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** [http://www.uniprot.org/uniprot/Q9JVY6 Q9JVY6]
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** [http://www.uniprot.org/uniprot/P48527 P48527]
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** [http://www.uniprot.org/uniprot/Q49900 Q49900]
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** [http://www.uniprot.org/uniprot/P75122 P75122]
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** [http://www.uniprot.org/uniprot/P73141 P73141]
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** [http://www.uniprot.org/uniprot/P73144 P73144]
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** [http://www.uniprot.org/uniprot/P95982 P95982]
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** [http://www.uniprot.org/uniprot/P00952 P00952]
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** [http://www.uniprot.org/uniprot/P04077 P04077]
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** [http://www.uniprot.org/uniprot/P0AGJ9 P0AGJ9]
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** [http://www.uniprot.org/uniprot/P12063 P12063]
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** [http://www.uniprot.org/uniprot/P93363 P93363]
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** [http://www.uniprot.org/uniprot/O14055 O14055]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R02918 R02918]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Putative Tyrosyl-tRNA synthetase}}
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{{#set: ec number=EC-6.1.1.1}}
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{{#set: gene associated=CHC_T00009128001_1|CHC_T00009345001|CHC_T00009345001_1}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:24, 9 January 2019

Reaction TYROSINE--TRNA-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • Putative Tyrosyl-tRNA synthetase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNAtyr[c] + 1 ATP[c] + 1 L-tyrosine[c] => 1 diphosphate[c] + 1 an L-tyrosyl-[tRNAtyr][c] + 1 AMP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links





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