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| − | [[Category:Reaction]] | + | [[Category:Gene]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DXS-RXN DXS-RXN] == | + | == Gene CHC_T00003974001_1 == |
| − | * direction:
| + | |
| − | ** LEFT-TO-RIGHT
| + | |
| − | * common name:
| + | |
| − | ** 1-deoxyxylulose-5-phosphate synthase
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.2.1.7 EC-2.2.1.7]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reactions associated == |
| − | * With identifiers: | + | * Reaction: [[DLACTDEHYDROGNAD-RXN]] |
| − | ** 1 [[GAP]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEOXYXYLULOSE-5P]][c]
| + | ** Source: [[orthology-galdieria.sulphuraria]] |
| − | * With common name(s): | + | == Pathways associated == |
| − | ** 1 D-glyceraldehyde 3-phosphate[c] '''+''' 1 pyruvate[c] '''+''' 1 H+[c] '''=>''' 1 CO2[c] '''+''' 1 1-deoxy-D-xylulose 5-phosphate[c]
| + | * [[PWY4LZ-257]] |
| − | | + | * [[FERMENTATION-PWY]] |
| − | == Genes associated with this reaction ==
| + | * [[P122-PWY]] |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | * [[PWY-6454]] |
| − | * [[CHC_T00000865001_1]]
| + | * [[PWY-6901]] |
| − | ** [[pantograph]]-[[a.taliana]]
| + | * [[ALACAT2-PWY]] |
| − | * [[CHC_T00008758001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00000866001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00009061001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00003376001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00001454001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00001730001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | * [[CHC_T00008758001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00003402001_1]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | == Pathways == | + | |
| − | * [[NONMEVIPP-PWY]], methylerythritol phosphate pathway I: [http://metacyc.org/META/NEW-IMAGE?object=NONMEVIPP-PWY NONMEVIPP-PWY] | + | |
| − | ** '''7''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | * [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] | + | |
| − | ** '''3''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | * [[PWY-6891]], thiazole biosynthesis II (aerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6891 PWY-6891] | + | |
| − | ** '''3''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-6892]], thiazole biosynthesis I (facultative anaerobic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6892 PWY-6892] | + | |
| − | ** '''3''' reactions found over '''7''' reactions in the full pathway
| + | |
| − | * [[PWY-7560]], methylerythritol phosphate pathway II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7560 PWY-7560] | + | |
| − | ** '''8''' reactions found over '''9''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]: | + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | *** [[a.taliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA:
| + | {{#set: reaction associated=DLACTDEHYDROGNAD-RXN}} |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12605 12605]
| + | {{#set: pathway associated=PWY4LZ-257|FERMENTATION-PWY|P122-PWY|PWY-6454|PWY-6901|ALACAT2-PWY}} |
| − | * LIGAND-RXN:
| + | |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R05636 R05636]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=1-deoxyxylulose-5-phosphate synthase}} | + | |
| − | {{#set: ec number=EC-2.2.1.7}}
| + | |
| − | {{#set: gene associated=CHC_T00000865001_1|CHC_T00008758001_1|CHC_T00000866001_1|CHC_T00009061001_1|CHC_T00003376001_1|CHC_T00001454001_1|CHC_T00001730001_1|CHC_T00008758001|CHC_T00003402001_1}}
| + | |
| − | {{#set: in pathway=NONMEVIPP-PWY|PYRIDOXSYN-PWY|PWY-6891|PWY-6892|PWY-7560}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
