Difference between revisions of "RXN0-4222"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13375 CPD-13375] == * smiles: ** C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Metabolite]]
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[[Category:Reaction]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13375 CPD-13375] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-4222 RXN0-4222] ==
* smiles:
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* direction:
** C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(C(C(C(CO3)O)O)O))4)OC6(C(O)C(O)C(OC(COC5(C(C(C(CO5)O)O)O))6)OC7(C(O)C(O)C(O)OC(CO)7)))))O)O)O)
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** LEFT-TO-RIGHT
* inchi key:
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* ec number:
** InChIKey=PZUPAGRIHCRVKN-SPHBQONKSA-N
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** [http://enzyme.expasy.org/EC/3.1.13.1 EC-3.1.13.1]
* common name:
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** XXXG xyloglucan oligosaccharide
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* molecular weight:
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** 1062.931   
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* Synonym(s):
 
* Synonym(s):
  
== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
== Reaction(s) known to produce the compound ==
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* With identifiers:
* [[RXN-12400]]
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** 1 [[CPD0-2351]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[Ribonucleoside-Monophosphates]][c] '''+''' 1 [[CPD0-2354]][c]
* [[RXN-12399]]
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* With common name(s):
* [[RXN-12398]]
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** 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] '''+''' 1 H2O[c] '''=>''' 1 a ribonucleoside 5'-monophosphate[c] '''+''' 1 a tRNA precursor with a 5' extension[c]
== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00003097001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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== Pathways  ==
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* [[PWY0-1479]], tRNA processing: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1479 PWY0-1479]
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** '''6''' reactions found over '''10''' reactions in the full pathway
 +
== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
* PUBCHEM:
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{{#set: direction=LEFT-TO-RIGHT}}
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=52940180 52940180]
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{{#set: ec number=EC-3.1.13.1}}
{{#set: smiles=C1(C(C(C(C(O1)OCC2(OC(C(O)C(O)C(O)2)OC4(C(O)C(O)C(OC(COC3(C(C(C(CO3)O)O)O))4)OC6(C(O)C(O)C(OC(COC5(C(C(C(CO5)O)O)O))6)OC7(C(O)C(O)C(O)OC(CO)7)))))O)O)O)}}
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{{#set: gene associated=CHC_T00003097001_1}}
{{#set: inchi key=InChIKey=PZUPAGRIHCRVKN-SPHBQONKSA-N}}
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{{#set: in pathway=PWY0-1479}}
{{#set: common name=XXXG xyloglucan oligosaccharide}}
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{{#set: reconstruction category=orthology}}
{{#set: molecular weight=1062.931    }}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
{{#set: produced by=RXN-12400|RXN-12399|RXN-12398}}
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{{#set: reconstruction tool=pantograph}}

Latest revision as of 17:37, 23 May 2018

Reaction RXN0-4222

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a tRNA precursor with a 5' extension and a long 3' trailer[c] + 1 H2O[c] => 1 a ribonucleoside 5'-monophosphate[c] + 1 a tRNA precursor with a 5' extension[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-1479, tRNA processing: PWY0-1479
    • 6 reactions found over 10 reactions in the full pathway

Reconstruction information

External links