Difference between revisions of "CPD-316"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** nucleoside-diphosphate...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=DUDPKIN-RXN DUDPKIN-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-316 CPD-316] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C)
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* molecular weight:
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** 378.384   
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* inchi key:
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** InChIKey=UTKDOUCGQVLJIN-PIGZVRMJSA-N
 
* common name:
 
* common name:
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** nucleoside-diphosphate kinase
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** reduced riboflavin
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* ec number:
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** [http://enzyme.expasy.org/EC/2.7.4.6 EC-2.7.4.6]
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* Synonym(s):
 
* Synonym(s):
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** 4a,5-dihydroriboflavine
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** 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-4a,5-dihydroisoalloxazine
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** 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[ATP]][c] '''+''' 1 [[DUDP]][c] '''=>''' 1 [[ADP]][c] '''+''' 1 [[DUTP]][c]
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* [[NADPH-DEHYDROGENASE-FLAVIN-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 ATP[c] '''+''' 1 dUDP[c] '''=>''' 1 ADP[c] '''+''' 1 dUTP[c]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00009233001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009233001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00009258001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009258001_1]]
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** [[pantograph]]-[[a.taliana]]
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== Pathways  ==
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* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
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** '''12''' reactions found over '''17''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* BIGG : rbflvrd
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28582 28582]
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* LIGAND-CPD:
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?C01007 C01007]
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** [http://www.genome.jp/dbget-bin/www_bget?R02331 R02331]
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* HMDB : HMDB01557
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{{#set: direction=LEFT-TO-RIGHT}}
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* CHEMSPIDER:
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{{#set: common name=nucleoside-diphosphate kinase}}
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** [http://www.chemspider.com/Chemical-Structure.52885.html 52885]
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{{#set: ec number=EC-2.7.4.6}}
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* CHEBI:
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{{#set: gene associated=CHC_T00009233001|CHC_T00009233001_1|CHC_T00009258001|CHC_T00009258001_1}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=8798 8798]
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{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
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* PUBCHEM:
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{{#set: reconstruction category=orthology}}
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=45480537 45480537]
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{{#set: reconstruction tool=pantograph}}
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{{#set: smiles=CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C)}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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{{#set: molecular weight=378.384    }}
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{{#set: reconstruction category=annotation}}
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{{#set: inchi key=InChIKey=UTKDOUCGQVLJIN-PIGZVRMJSA-N}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: common name=reduced riboflavin}}
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{{#set: reconstruction source=original_genome}}
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{{#set: common name=4a,5-dihydroriboflavine|7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-4a,5-dihydroisoalloxazine|7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione}}
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{{#set: produced by=NADPH-DEHYDROGENASE-FLAVIN-RXN}}

Latest revision as of 17:32, 9 January 2019

Metabolite CPD-316

  • smiles:
    • CC1(=C(C=C2(C(=C1)NC3(C(N2CC(O)C(O)C(O)CO)=NC(NC3=O)=O)))C)
  • molecular weight:
    • 378.384
  • inchi key:
    • InChIKey=UTKDOUCGQVLJIN-PIGZVRMJSA-N
  • common name:
    • reduced riboflavin
  • Synonym(s):
    • 4a,5-dihydroriboflavine
    • 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-4a,5-dihydroisoalloxazine
    • 7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links



"7,8-dimethyl-10-(D-ribo-2,3,4,5-tetrahydroxypentyl)-5,10-dihydrobenzo[g]pteridine-2,4(3H,4aH)-dione" cannot be used as a page name in this wiki.
Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CPD-316&oldid=23213"