Difference between revisions of "AIRS-RXN"

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(Created page with "Category:Gene == Gene CHC_T00009136001 == * left end position: ** 3002 * transcription direction: ** NEGATIVE * right end position: ** 3421 * centisome position: ** 50.016...")
 
 
(One intermediate revision by the same user not shown)
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00009136001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=AIRS-RXN AIRS-RXN] ==
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* left end position:
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* direction:
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** 3002
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** phosphoribosylformylglycinamidine cyclo-ligase (phosphoribosyl-aminoimidazole synthetase) (AIR synthase)
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* right end position:
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* ec number:
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** 3421
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** [http://enzyme.expasy.org/EC/6.3.3.1 EC-6.3.3.1]
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* centisome position:
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** 50.01666   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[GLYOXI-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[5-PHOSPHORIBOSYL-5-AMINOIMIDAZOLE]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[PROTON]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c] '''+''' 1 ATP[c] '''=>''' 1 5-amino-1-(5-phospho-β-D-ribosyl)imidazole[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c] '''+''' 1 H+[c]
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* [[PWY-5386]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00008410001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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* Gene: [[CHC_T00008410001]]
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** Source: [[annotation-original_genome]]
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*** Assignment: AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
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* Category: [[annotation]]
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** Source: [[annotation-original_genome]]
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*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=3002}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23032 23032]
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{{#set: right end position=3421}}
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* UNIPROT:
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{{#set: centisome position=50.01666    }}
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** [http://www.uniprot.org/uniprot/P07244 P07244]
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{{#set: reaction associated=GLYOXI-RXN}}
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** [http://www.uniprot.org/uniprot/P12043 P12043]
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{{#set: pathway associated=PWY-5386}}
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** [http://www.uniprot.org/uniprot/P21872 P21872]
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** [http://www.uniprot.org/uniprot/P08178 P08178]
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** [http://www.uniprot.org/uniprot/P00967 P00967]
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** [http://www.uniprot.org/uniprot/P16340 P16340]
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** [http://www.uniprot.org/uniprot/P22102 P22102]
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** [http://www.uniprot.org/uniprot/Q57656 Q57656]
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** [http://www.uniprot.org/uniprot/O66968 O66968]
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** [http://www.uniprot.org/uniprot/Q9JUA2 Q9JUA2]
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** [http://www.uniprot.org/uniprot/P43848 P43848]
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** [http://www.uniprot.org/uniprot/Q9PME0 Q9PME0]
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** [http://www.uniprot.org/uniprot/Q64737 Q64737]
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** [http://www.uniprot.org/uniprot/P20772 P20772]
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** [http://www.uniprot.org/uniprot/Q55422 Q55422]
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** [http://www.uniprot.org/uniprot/P52424 P52424]
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* LIGAND-RXN:
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** [http://www.genome.jp/dbget-bin/www_bget?R04208 R04208]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=phosphoribosylformylglycinamidine cyclo-ligase (phosphoribosyl-aminoimidazole synthetase) (AIR synthase)}}
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{{#set: ec number=EC-6.3.3.1}}
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{{#set: gene associated=CHC_T00008410001_1|CHC_T00008410001}}
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{{#set: in pathway=PWY-6122|PWY-6277|PWY-6121}}
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{{#set: reconstruction category=orthology|annotation}}
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{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome}}
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{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:29, 9 January 2019

Reaction AIRS-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • phosphoribosylformylglycinamidine cyclo-ligase (phosphoribosyl-aminoimidazole synthetase) (AIR synthase)
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=AIRS-RXN&oldid=23165"