Difference between revisions of "SPERMIDINESYN-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=ARG-tRNAs ARG-tRNAs] == * common name: ** a tRNAarg * Synonym(s): ** TRNA(ARG) == Reaction(s)...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] == * direction: ** REVERSIBLE * common name: ** putrescine ami...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SPERMIDINESYN-RXN SPERMIDINESYN-RXN] == |
| + | * direction: | ||
| + | ** REVERSIBLE | ||
* common name: | * common name: | ||
| − | ** | + | ** putrescine aminopropyltransferase (spermidine synthase) |
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.5.1.16 EC-2.5.1.16] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[S-ADENOSYLMETHIONINAMINE]][c] '''+''' 1 [[PUTRESCINE]][c] '''<=>''' 1 [[5-METHYLTHIOADENOSINE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[SPERMIDINE]][c] |
| − | * [[ | + | * With common name(s): |
| − | == | + | ** 1 S-adenosyl 3-(methylthio)propylamine[c] '''+''' 1 putrescine[c] '''<=>''' 1 S-methyl-5'-thioadenosine[c] '''+''' 1 H+[c] '''+''' 1 spermidine[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[CHC_T00009140001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | * Gene: [[CHC_T00009140001]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00002289001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | == Pathways == | ||
| + | * [[BSUBPOLYAMSYN-PWY]], spermidine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=BSUBPOLYAMSYN-PWY BSUBPOLYAMSYN-PWY] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: common name= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12721 12721] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R01920 R01920] |
| + | * UNIPROT: | ||
| + | ** [http://www.uniprot.org/uniprot/P19623 P19623] | ||
| + | ** [http://www.uniprot.org/uniprot/Q57761 Q57761] | ||
| + | ** [http://www.uniprot.org/uniprot/Q12074 Q12074] | ||
| + | ** [http://www.uniprot.org/uniprot/Q12455 Q12455] | ||
| + | ** [http://www.uniprot.org/uniprot/P09158 P09158] | ||
| + | ** [http://www.uniprot.org/uniprot/O48660 O48660] | ||
| + | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: common name=putrescine aminopropyltransferase (spermidine synthase)}} | ||
| + | {{#set: ec number=EC-2.5.1.16}} | ||
| + | {{#set: gene associated=CHC_T00009140001_1|CHC_T00009140001|CHC_T00002289001_1}} | ||
| + | {{#set: in pathway=BSUBPOLYAMSYN-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 16:50, 23 May 2018
Contents
Reaction SPERMIDINESYN-RXN
- direction:
- REVERSIBLE
- common name:
- putrescine aminopropyltransferase (spermidine synthase)
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINAMINE[c] + 1 PUTRESCINE[c] <=> 1 5-METHYLTHIOADENOSINE[c] + 1 PROTON[c] + 1 SPERMIDINE[c]
- With common name(s):
- 1 S-adenosyl 3-(methylthio)propylamine[c] + 1 putrescine[c] <=> 1 S-methyl-5'-thioadenosine[c] + 1 H+[c] + 1 spermidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009140001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00009140001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00002289001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- BSUBPOLYAMSYN-PWY, spermidine biosynthesis I: BSUBPOLYAMSYN-PWY
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
