Difference between revisions of "GMP-SYN-GLUT-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13851 CPD-13851] == * smiles: ** C(C3(C(CC(N2(C1(=C(C(N)=NC(=O)N1)N=C2)))O3)O))OP(OP(OP([O-...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GMP synthase...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13851 CPD-13851] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GMP-SYN-GLUT-RXN GMP-SYN-GLUT-RXN] ==
−
* smiles:
+
* direction:
−
** C(C3(C(CC(N2(C1(=C(C(N)=NC(=O)N1)N=C2)))O3)O))OP(OP(OP([O-])(=O)[O-])([O-])=O)([O-])=O
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=UOACBPRDWRDEHJ-KVQBGUIXSA-J
+
 
* common name:
 
* common name:
−
** 2-hydroxy-dATP
+
** GMP synthase (glutamine-hydrolysing)
−
* molecular weight:
+
* ec number:
−
** 503.152   
+
** [http://enzyme.expasy.org/EC/6.3.5.2 EC-6.3.5.2]
 
* Synonym(s):
 
* Synonym(s):
−
** 2-hydroxy-2'-deoxyadenosine 5'-triphosphate
 
−
** 2'-deoxyisoguanosine triphosphate
 
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
== Reaction(s) known to produce the compound ==
+
* With identifiers:
−
* [[RXN-14290]]
+
** 1 [[GLN]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[GMP]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[GLT]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[PPI]][c]
−
== Reaction(s) of unknown directionality ==
+
* With common name(s):
 +
** 1 L-glutamine[c] '''+''' 1 XMP[c] '''+''' 1 H2O[c] '''+''' 1 ATP[c] '''=>''' 1 GMP[c] '''+''' 1 AMP[c] '''+''' 1 L-glutamate[c] '''+''' 2 H+[c] '''+''' 1 diphosphate[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009427001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009427001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
== Pathways  ==
 +
* [[PWY-7221]], guanosine ribonucleotides de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7221 PWY-7221]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* RHEA:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=86289402 86289402]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11680 11680]
−
* CHEBI:
+
* LIGAND-RXN:
−
** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=77897 77897]
+
** [http://www.genome.jp/dbget-bin/www_bget?R01231 R01231]
−
{{#set: smiles=C(C3(C(CC(N2(C1(=C(C(N)=NC(=O)N1)N=C2)))O3)O))OP(OP(OP([O-])(=O)[O-])([O-])=O)([O-])=O}}
+
* UNIPROT:
−
{{#set: inchi key=InChIKey=UOACBPRDWRDEHJ-KVQBGUIXSA-J}}
+
** [http://www.uniprot.org/uniprot/P32073 P32073]
−
{{#set: common name=2-hydroxy-dATP}}
+
** [http://www.uniprot.org/uniprot/P49915 P49915]
−
{{#set: molecular weight=503.152    }}
+
** [http://www.uniprot.org/uniprot/O25165 O25165]
−
{{#set: common name=2-hydroxy-2'-deoxyadenosine 5'-triphosphate|2'-deoxyisoguanosine triphosphate}}
+
** [http://www.uniprot.org/uniprot/Q58531 Q58531]
−
{{#set: produced by=RXN-14290}}
+
** [http://www.uniprot.org/uniprot/Q9PN49 Q9PN49]
 +
** [http://www.uniprot.org/uniprot/P29727 P29727]
 +
** [http://www.uniprot.org/uniprot/O66601 O66601]
 +
** [http://www.uniprot.org/uniprot/P49056 P49056]
 +
** [http://www.uniprot.org/uniprot/Q9CFJ0 Q9CFJ0]
 +
** [http://www.uniprot.org/uniprot/Q9JW60 Q9JW60]
 +
** [http://www.uniprot.org/uniprot/P44335 P44335]
 +
** [http://www.uniprot.org/uniprot/P38625 P38625]
 +
** [http://www.uniprot.org/uniprot/P49057 P49057]
 +
** [http://www.uniprot.org/uniprot/P04079 P04079]
 +
** [http://www.uniprot.org/uniprot/Q7VLE9 Q7VLE9]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=GMP synthase (glutamine-hydrolysing)}}
 +
{{#set: ec number=EC-6.3.5.2}}
 +
{{#set: gene associated=CHC_T00009427001|CHC_T00009427001_1}}
 +
{{#set: in pathway=PWY-7221}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:53, 23 May 2018

Reaction GMP-SYN-GLUT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • GMP synthase (glutamine-hydrolysing)
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 XMP[c] + 1 H2O[c] + 1 ATP[c] => 1 GMP[c] + 1 AMP[c] + 1 L-glutamate[c] + 2 H+[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7221, guanosine ribonucleotides de novo biosynthesis: PWY-7221
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GMP-SYN-GLUT-RXN&oldid=18426"