Difference between revisions of "ACYL-COA-OXIDASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11521 CPD-11521] == * smiles: ** CCC=CCC4(C(=O)CCC(CCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-...")
Line 1: Line 1:
−
[[Category:Metabolite]]
+
[[Category:Reaction]]
−
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11521 CPD-11521] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYL-COA-OXIDASE-RXN ACYL-COA-OXIDASE-RXN] ==
−
* smiles:
+
* direction:
−
** CCC=CCC4(C(=O)CCC(CCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)
+
** LEFT-TO-RIGHT
−
* inchi key:
+
−
** InChIKey=VWFUYQVGVAEVNH-CNALLRBTSA-J
+
 
* common name:
 
* common name:
−
** OPC6-CoA
+
** acyl-CoA oxidase
−
* molecular weight:
+
* ec number:
−
** 1011.867   
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction(s) known to consume the compound ==
+
== Reaction Formula ==
−
* [[RXN-10706]]
+
* With identifiers:
−
== Reaction(s) known to produce the compound ==
+
** 1 [[ACYL-COA]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[TRANS-D2-ENOYL-COA]][c]
−
* [[RXN-10699]]
+
* With common name(s):
−
== Reaction(s) of unknown directionality ==
+
** 1 an acyl-CoA[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 a trans-2-enoyl-CoA[c]
 +
 
 +
== Genes associated with this reaction  ==
 +
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[CHC_T00009142001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009531001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008478001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008400001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00009142001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008400001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009531001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00007910001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00008935001]]
 +
** Source: [[annotation-original_genome]]
 +
*** Assignment: AUTOMATED-NAME-MATCH
 +
* Gene: [[CHC_T00008935001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
* [[PWY-7007]], methyl ketone biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7007 PWY-7007]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 +
* Category: [[annotation]]
 +
** Source: [[annotation-original_genome]]
 +
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
−
* PUBCHEM:
+
* PIR:
−
** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=44237133 44237133]
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52121 T52121]
−
{{#set: smiles=CCC=CCC4(C(=O)CCC(CCCCCC(SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-])=O)4)}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T52120 T52120]
−
{{#set: inchi key=InChIKey=VWFUYQVGVAEVNH-CNALLRBTSA-J}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=T04418 T04418]
−
{{#set: common name=OPC6-CoA}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S64224 S64224]
−
{{#set: molecular weight=1011.867    }}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=S40722 S40722]
−
{{#set: consumed by=RXN-10706}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA2 OXRTA2]
−
{{#set: produced by=RXN-10699}}
+
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXRTA1 OXRTA1]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX5 OXCKX5]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX4 OXCKX4]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKX OXCKX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKPM OXCKPM]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKP2 OXCKP2]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=OXCKAX OXCKAX]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=JC4563 JC4563]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=I38095 I38095]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=B54942 B54942]
 +
** [http://pir.georgetown.edu/cgi-bin/nbrfget?uid=A54942 A54942]
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R00388 R00388]
 +
* UNIPROT:
 +
** [http://www.uniprot.org/uniprot/Q15067 Q15067]
 +
** [http://www.uniprot.org/uniprot/Q00468 Q00468]
 +
** [http://www.uniprot.org/uniprot/P06598 P06598]
 +
** [http://www.uniprot.org/uniprot/P11356 P11356]
 +
** [http://www.uniprot.org/uniprot/P07872 P07872]
 +
** [http://www.uniprot.org/uniprot/P34355 P34355]
 +
** [http://www.uniprot.org/uniprot/P13711 P13711]
 +
** [http://www.uniprot.org/uniprot/O23977 O23977]
 +
** [http://www.uniprot.org/uniprot/O65201 O65201]
 +
** [http://www.uniprot.org/uniprot/O65202 O65202]
 +
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: common name=acyl-CoA oxidase}}
 +
{{#set: ec number=EC-1.3.3.6}}
 +
{{#set: gene associated=CHC_T00009142001|CHC_T00009531001|CHC_T00008478001_1|CHC_T00008400001|CHC_T00009142001_1|CHC_T00008400001_1|CHC_T00009531001_1|CHC_T00007910001_1|CHC_T00008935001|CHC_T00008935001_1}}
 +
{{#set: in pathway=PWY-7007}}
 +
{{#set: reconstruction category=orthology|annotation}}
 +
{{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 +
{{#set: reconstruction tool=pantograph|pathwaytools}}

Revision as of 16:56, 23 May 2018

Reaction ACYL-COA-OXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7007, methyl ketone biosynthesis (engineered): PWY-7007
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=ACYL-COA-OXIDASE-RXN&oldid=18588"