Difference between revisions of "RXN-17368"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13378 CPD-13378] == * smiles: ** C9(C(C(C(C(OCC8(OC(OC3(C(O)C(O)C(OC(COC1(C(C(C(CO1)O)O)OC2...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17368 RXN-17368] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17368 RXN-17368] == |
| − | * | + | * direction: |
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | * ec number: | |
| − | + | ** [http://enzyme.expasy.org/EC/6.3.4 EC-6.3.4] | |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == Reaction(s) | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | == | + | ** 1 [[CPD-18779]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[GLY]][c] '''=>''' 1 [[Pi]][c] '''+''' 1 [[CPD-18777]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[ADP]][c] |
| − | == | + | * With common name(s): |
| + | ** 1 (S)-4-deoxygadusol[c] '''+''' 1 ATP[c] '''+''' 1 glycine[c] '''=>''' 1 phosphate[c] '''+''' 1 mycosporine glycine[c] '''+''' 2 H+[c] '''+''' 1 ADP[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[Scaffold115_51547_52668]] | ||
| + | ** Source: [[manual-pathmodel_inference]] | ||
| + | == Pathways == | ||
| + | * [[PWY-7751]], shinorine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7751 PWY-7751] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[gap-filling]] | ||
| + | ** Source: [[gap-filling-gapfilling_solution_with_meneco_draft_medium]] | ||
| + | *** Tool: [[meneco]] | ||
| + | **** Comment: [[added for gapfilling]] | ||
| + | * Category: [[manual]] | ||
| + | ** Source: [[manual-pathmodel_inference]] | ||
| + | *** Comment: [[meneco;brawley2017;tblastn]] | ||
== External links == | == External links == | ||
| − | + | {{#set: direction=LEFT-TO-RIGHT}} | |
| − | + | {{#set: ec number=EC-6.3.4}} | |
| − | {{#set: | + | {{#set: gene associated=Scaffold115_51547_52668}} |
| − | {{#set: | + | {{#set: in pathway=PWY-7751}} |
| − | {{#set: | + | {{#set: reconstruction category=gap-filling|manual}} |
| − | {{#set: | + | {{#set: reconstruction source=gap-filling-gapfilling_solution_with_meneco_draft_medium|manual-pathmodel_inference}} |
| − | {{#set: | + | {{#set: reconstruction tool=meneco}} |
| + | {{#set: reconstruction comment=added for gapfilling|meneco;brawley2017;tblastn}} | ||
Revision as of 17:56, 23 May 2018
Contents
Reaction RXN-17368
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 (S)-4-deoxygadusol[c] + 1 ATP[c] + 1 glycine[c] => 1 phosphate[c] + 1 mycosporine glycine[c] + 2 H+[c] + 1 ADP[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: Scaffold115_51547_52668
- Source: manual-pathmodel_inference
Pathways
Reconstruction information
- Category: gap-filling
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
- Tool: meneco
- Comment: added for gapfilling
- Tool: meneco
- Source: gap-filling-gapfilling_solution_with_meneco_draft_medium
- Category: manual
- Source: manual-pathmodel_inference
- Comment: meneco;brawley2017;tblastn
- Source: manual-pathmodel_inference
