Difference between revisions of "RXN-8038"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/5.5.1...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUCOKIN-RXN GLUCOKIN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-8038 RXN-8038] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.7.1.1 EC-2.7.1.1]
+
** [http://enzyme.expasy.org/EC/5.5.1 EC-5.5.1]
−
** [http://enzyme.expasy.org/EC/2.7.1.2 EC-2.7.1.2]
+
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[ATP]][c] '''+''' 1 [[Glucopyranose]][c] '''=>''' 1 [[D-glucopyranose-6-phosphate]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[NEUROSPORENE]][c] '''<=>''' 1 [[CPD-7419]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 ATP[c] '''+''' 1 D-glucopyranose[c] '''=>''' 1 D-glucopyranose 6-phosphate[c] '''+''' 1 H+[c] '''+''' 1 ADP[c]
+
** 1 all-trans neurosporene[c] '''<=>''' 1 &beta;-zeacarotene[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00001373001_1]]
+
* Gene: [[CHC_T00009401001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00009131001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00010245001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008616001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00002318001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009303001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00010004001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00009499001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008813001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008663001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00009062001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00003979001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
* Gene: [[CHC_T00008672001_1]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY0-1182]], trehalose degradation II (trehalase): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1182 PWY0-1182]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
* [[TREDEGLOW-PWY]], trehalose degradation I (low osmolarity): [http://metacyc.org/META/NEW-IMAGE?object=TREDEGLOW-PWY TREDEGLOW-PWY]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[GLYCOCAT-PWY]], glycogen degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOCAT-PWY GLYCOCAT-PWY]
 
−
** '''7''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-621]], sucrose degradation III (sucrose invertase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-621 PWY-621]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-7385]], 1,3-propanediol biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7385 PWY-7385]
 
−
** '''5''' reactions found over '''9''' reactions in the full pathway
 
−
* [[GLUCOSE1PMETAB-PWY]], glucose and glucose-1-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=GLUCOSE1PMETAB-PWY GLUCOSE1PMETAB-PWY]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[P124-PWY]], Bifidobacterium shunt: [http://metacyc.org/META/NEW-IMAGE?object=P124-PWY P124-PWY]
 
−
** '''11''' reactions found over '''15''' reactions in the full pathway
 
−
* [[PWY-5514]], UDP-N-acetyl-D-galactosamine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5514 PWY-5514]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-7238]], sucrose biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7238 PWY-7238]
 
−
** '''6''' reactions found over '''8''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]], glycolysis III (from glucose): [http://metacyc.org/META/NEW-IMAGE?object=ANAGLYCOLYSIS-PWY ANAGLYCOLYSIS-PWY]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-2723]], trehalose degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2723 PWY-2723]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY]
 
−
** '''15''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-2722]], trehalose degradation IV: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2722 PWY-2722]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5661]], GDP-glucose biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5661 PWY-5661]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-arabidopsis_thaliana]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17825 17825]
 
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R01786 R01786]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04801 R04801]
−
** [http://www.genome.jp/dbget-bin/www_bget?R00299 R00299]
+
{{#set: direction=REVERSIBLE}}
−
* UNIPROT:
+
{{#set: ec number=EC-5.5.1}}
−
** [http://www.uniprot.org/uniprot/P0A6V8 P0A6V8]
+
{{#set: gene associated=CHC_T00009401001_1|CHC_T00009131001_1|CHC_T00010245001_1|CHC_T00008616001_1|CHC_T00002318001_1|CHC_T00009303001_1|CHC_T00010004001_1|CHC_T00009499001_1|CHC_T00008813001_1|CHC_T00008663001_1|CHC_T00009062001_1|CHC_T00003979001_1|CHC_T00008672001_1}}
−
** [http://www.uniprot.org/uniprot/P21908 P21908]
+
{{#set: in pathway=}}
−
** [http://www.uniprot.org/uniprot/P64254 P64254]
+
−
** [http://www.uniprot.org/uniprot/Q8XDH5 Q8XDH5]
+
−
** [http://www.uniprot.org/uniprot/Q8XDH4 Q8XDH4]
+
−
** [http://www.uniprot.org/uniprot/Q9CE25 Q9CE25]
+
−
** [http://www.uniprot.org/uniprot/P52792 P52792]
+
−
** [http://www.uniprot.org/uniprot/Q9V2Z6 Q9V2Z6]
+
−
** [http://www.uniprot.org/uniprot/Q7M537 Q7M537]
+
−
** [http://www.uniprot.org/uniprot/P17709 P17709]
+
−
** [http://www.uniprot.org/uniprot/Q04409 Q04409]
+
−
** [http://www.uniprot.org/uniprot/Q92407 Q92407]
+
−
** [http://www.uniprot.org/uniprot/O31392 O31392]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: ec number=EC-2.7.1.1}}
+
−
{{#set: ec number=EC-2.7.1.2}}
+
−
{{#set: gene associated=CHC_T00001373001_1}}
+
−
{{#set: in pathway=PWY0-1182|TREDEGLOW-PWY|GLYCOCAT-PWY|PWY-621|PWY-7385|GLUCOSE1PMETAB-PWY|P124-PWY|PWY-5514|PWY-7238|ANAGLYCOLYSIS-PWY|PWY-2723|P122-PWY|PWY-2722|PWY-5661}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Revision as of 16:58, 23 May 2018

Reaction RXN-8038

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 all-trans neurosporene[c] <=> 1 β-zeacarotene[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-8038&oldid=18699"