Difference between revisions of "RETINAL"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.83-RXN 2.4.1.83-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** probable dolichyl-pho...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] == * smiles: ** CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O * inchi key: ** I...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.4.1.83-RXN 2.4.1.83-RXN] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=RETINAL RETINAL] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O
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* inchi key:
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** InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N
 
* common name:
 
* common name:
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** probable dolichyl-phosphate mannosyltransferase
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** all-trans-retinal
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/2.4.1.83 EC-2.4.1.83]
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** 284.441   
 
* Synonym(s):
 
* Synonym(s):
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** vitamin A aldehyde
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** retinene
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** axerophthal
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** retinaldehyde
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** retinal
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** all-trans-Vitamin A aldehyde
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** all-trans-retinene
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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== Reaction(s) known to produce the compound ==
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** 1 [[GDP-MANNOSE]][c] '''+''' 1 [[DOLICHOLP]][c] '''=>''' 1 [[CPD-171]][c] '''+''' 1 [[GDP]][c]
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== Reaction(s) of unknown directionality ==
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* With common name(s):
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* [[RXN-10841]]
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** 1 GDP-α-D-mannose[c] '''+''' 1 a dolichyl phosphate[c] '''=>''' 1 a dolichyl β-D-mannosyl phosphate[c] '''+''' 1 GDP[c]
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* [[RETINOL-DEHYDROGENASE-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00009153001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00009153001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''12''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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* CAS : 116-31-4
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21184 21184]
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* LIPID_MAPS : LMPR01090002
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01009 R01009]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=638015 638015]
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* UNIPROT:
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* HMDB : HMDB01358
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** [http://www.uniprot.org/uniprot/P14020 P14020]
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/Q26732 Q26732]
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** [http://www.genome.jp/dbget-bin/www_bget?C00376 C00376]
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** [http://www.uniprot.org/uniprot/P54856 P54856]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q9TYJ7 Q9TYJ7]
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** [http://www.chemspider.com/Chemical-Structure.553582.html 553582]
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** [http://www.uniprot.org/uniprot/O14466 O14466]
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* CHEBI:
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{{#set: direction=LEFT-TO-RIGHT}}
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=17898 17898]
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{{#set: common name=probable dolichyl-phosphate mannosyltransferase}}
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* METABOLIGHTS : MTBLC17898
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{{#set: ec number=EC-2.4.1.83}}
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{{#set: smiles=CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O}}
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{{#set: gene associated=CHC_T00009153001|CHC_T00009153001_1}}
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{{#set: inchi key=InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: common name=all-trans-retinal}}
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{{#set: reconstruction category=orthology}}
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{{#set: molecular weight=284.441    }}
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{{#set: reconstruction tool=pantograph}}
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{{#set: common name=vitamin A aldehyde|retinene|axerophthal|retinaldehyde|retinal|all-trans-Vitamin A aldehyde|all-trans-retinene}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reversible reaction associated=RXN-10841|RETINOL-DEHYDROGENASE-RXN}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 18:00, 23 May 2018

Metabolite RETINAL

  • smiles:
    • CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O
  • inchi key:
    • InChIKey=NCYCYZXNIZJOKI-OVSJKPMPSA-N
  • common name:
    • all-trans-retinal
  • molecular weight:
    • 284.441
  • Synonym(s):
    • vitamin A aldehyde
    • retinene
    • axerophthal
    • retinaldehyde
    • retinal
    • all-trans-Vitamin A aldehyde
    • all-trans-retinene

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

  • CAS : 116-31-4
  • LIPID_MAPS : LMPR01090002
  • PUBCHEM:
  • HMDB : HMDB01358
  • LIGAND-CPD:
  • CHEMSPIDER:
  • CHEBI:
  • METABOLIGHTS : MTBLC17898
"CC(C=CC1(C(C)(C)CCCC(C)=1))=CC=CC(C)=C[CH]=O" cannot be used as a page name in this wiki.



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