Difference between revisions of "P105-PWY"

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(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-11...")
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[[Category:Pathway]]
 
[[Category:Pathway]]
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7250 PWY-7250] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY] ==
 
* taxonomic range:
 
* taxonomic range:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1117 TAX-1117]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3035 TAX-3035]
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2157 TAX-2157]
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1224 TAX-1224]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174]
 
* common name:
 
* common name:
−
** [2Fe-2S] iron-sulfur cluster biosynthesis
+
** TCA cycle IV (2-oxoglutarate decarboxylase)
 
* Synonym(s):
 
* Synonym(s):
−
** [Fe-S] cluster biosynthesis
+
** citric acid cycle
−
** [2Fe-2S] cluster biosynthesis
+
** tricarboxylic acid cycle
 +
** Szent-Gyorgyi-Krebs cycle
 +
** Krebs cycle
  
 
== Reaction(s) found ==
 
== Reaction(s) found ==
−
  '''8''' reactions found over '''10''' reactions in the full pathway
+
  '''8''' reactions found over '''11''' reactions in the full pathway
−
* [[RXN-14381]]
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* [[ACONITATEDEHYDR-RXN]]
−
* [[RXN-14384]]
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** 3 associated gene(s):
−
* [[RXN-14385]]
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*** [[CHC_T00009087001_1]]
−
* [[RXN-14386]]
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*** [[CHC_T00008781001_1]]
−
* [[RXN-14389]]
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*** [[CHC_T00008781001]]
−
* [[RXN-14390]]
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** 3 reconstruction source(s) associated:
−
* [[RXN-14391]]
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*** [[annotation-original_genome]]
−
* [[RXN-15881]]
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*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[ACONITATEHYDR-RXN]]
 +
** 3 associated gene(s):
 +
*** [[CHC_T00009087001_1]]
 +
*** [[CHC_T00008781001]]
 +
*** [[CHC_T00008781001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[CITSYN-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00007817001_1]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[FUMHYDR-RXN]]
 +
** 2 associated gene(s):
 +
*** [[CHC_T00008951001_1]]
 +
*** [[CHC_T00008951001]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[ISOCITDEH-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00009580001_1]]
 +
** 2 reconstruction source(s) associated:
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[MALATE-DEH-RXN]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00008733001]]
 +
*** [[CHC_T00009350001_1]]
 +
*** [[CHC_T00009173001_1]]
 +
*** [[CHC_T00009292001_1]]
 +
*** [[CHC_T00008733001_1]]
 +
*** [[CHC_T00008600001_1]]
 +
** 4 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-arabidopsis_thaliana]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[RXN-14971]]
 +
** 6 associated gene(s):
 +
*** [[CHC_T00006990001_1]]
 +
*** [[CHC_T00008943001]]
 +
*** [[CHC_T00001817001_1]]
 +
*** [[CHC_T00008943001_1]]
 +
*** [[CHC_T00007584001_1]]
 +
*** [[CHC_T00007286001_1]]
 +
** 3 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 +
*** [[orthology-ectocarpus_siliculosus]]
 +
*** [[orthology-galdieria.sulphuraria]]
 +
* [[SUCCSEMIALDDEHYDROG-RXN]]
 +
** 1 associated gene(s):
 +
*** [[CHC_T00008575001]]
 +
** 1 reconstruction source(s) associated:
 +
*** [[annotation-original_genome]]
 
== Reaction(s) not found ==
 
== Reaction(s) not found ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14387 RXN-14387]
+
* [http://metacyc.org/META/NEW-IMAGE?object=ISOCIT-CLEAV-RXN ISOCIT-CLEAV-RXN]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14388 RXN-14388]
+
* [http://metacyc.org/META/NEW-IMAGE?object=MALSYN-RXN MALSYN-RXN]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7774 RXN-7774]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
{{#set: taxonomic range=TAX-1117}}
−
{{#set: taxonomic range=TAX-2}}
+
{{#set: taxonomic range=TAX-3035}}
−
{{#set: taxonomic range=TAX-2157}}
+
{{#set: taxonomic range=TAX-1224}}
−
{{#set: common name=[2Fe-2S] iron-sulfur cluster biosynthesis}}
+
{{#set: taxonomic range=TAX-201174}}
−
{{#set: common name=[Fe-S] cluster biosynthesis|[2Fe-2S] cluster biosynthesis}}
+
{{#set: common name=TCA cycle IV (2-oxoglutarate decarboxylase)}}
 +
{{#set: common name=citric acid cycle|tricarboxylic acid cycle|Szent-Gyorgyi-Krebs cycle|Krebs cycle}}
 
{{#set: reaction found=8}}
 
{{#set: reaction found=8}}
−
{{#set: reaction not found=10}}
+
{{#set: total reaction=11}}
−
{{#set: completion rate=80.0}}
+
{{#set: completion rate=73.0}}

Revision as of 15:56, 23 May 2018

Pathway P105-PWY

  • taxonomic range:
  • common name:
    • TCA cycle IV (2-oxoglutarate decarboxylase)
  • Synonym(s):
    • citric acid cycle
    • tricarboxylic acid cycle
    • Szent-Gyorgyi-Krebs cycle
    • Krebs cycle

Reaction(s) found

8 reactions found over 11 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=P105-PWY&oldid=12664"