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| − | [[Category:Reaction]] | + | [[Category:Pathway]] |
| − | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SERINE-C-PALMITOYLTRANSFERASE-RXN SERINE-C-PALMITOYLTRANSFERASE-RXN] == | + | == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151] == |
| − | * direction: | + | * taxonomic range: |
| − | ** LEFT-TO-RIGHT | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-1239 TAX-1239] |
| | + | ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-201174 TAX-201174] |
| | * common name: | | * common name: |
| − | ** serine palmitoyltransferase, LCB1 subunit | + | ** L-tyrosine degradation II |
| − | ** serine palmitoyltransferase, LCB2 subunit
| + | |
| − | * ec number:
| + | |
| − | ** [http://enzyme.expasy.org/EC/2.3.1.50 EC-2.3.1.50]
| + | |
| | * Synonym(s): | | * Synonym(s): |
| | | | |
| − | == Reaction Formula == | + | == Reaction(s) found == |
| − | * With identifiers: | + | * '''1''' reaction(s) found |
| − | ** 1 [[SER]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[PALMITYL-COA]][c] '''=>''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[DEHYDROSPHINGANINE]][c] '''+''' 1 [[CO-A]][c]
| + | ** [[TYROSINE-AMINOTRANSFERASE-RXN]] |
| − | * With common name(s):
| + | == Reaction(s) not found == |
| − | ** 1 L-serine[c] '''+''' 1 H+[c] '''+''' 1 palmitoyl-CoA[c] '''=>''' 1 CO2[c] '''+''' 1 3-dehydrosphinganine[c] '''+''' 1 coenzyme A[c] | + | * '''1''' reaction(s) not found |
| − | | + | ** [http://metacyc.org/META/NEW-IMAGE?object=1.2.3.13-RXN 1.2.3.13-RXN] |
| − | == Genes associated with this reaction == | + | |
| − | Genes have been associated with this reaction based on different elements listed below.
| + | |
| − | * [[CHC_T00008326001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00008326001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | * [[CHC_T00008697001]]
| + | |
| − | ** ORIGINAL_GENOME
| + | |
| − | ***AUTOMATED-NAME-MATCH
| + | |
| − | * [[CHC_T00008697001_1]]
| + | |
| − | ** [[pantograph]]-[[galdieria.sulphuraria]]
| + | |
| − | ** [[pantograph]]-[[a.taliana]]
| + | |
| − | == Pathways ==
| + | |
| − | * [[PWY-5129]], sphingolipid biosynthesis (plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5129 PWY-5129]
| + | |
| − | ** '''3''' reactions found over '''13''' reactions in the full pathway
| + | |
| − | * [[PWY3DJ-12]], ceramide de novo biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY3DJ-12 PWY3DJ-12] | + | |
| − | ** '''3''' reactions found over '''4''' reactions in the full pathway
| + | |
| − | * [[SPHINGOLIPID-SYN-PWY]], sphingolipid biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=SPHINGOLIPID-SYN-PWY SPHINGOLIPID-SYN-PWY]
| + | |
| − | ** '''3''' reactions found over '''8''' reactions in the full pathway
| + | |
| − | == Reconstruction information ==
| + | |
| − | * [[orthology]]:
| + | |
| − | ** [[pantograph]]:
| + | |
| − | *** [[galdieria.sulphuraria]]
| + | |
| − | *** [[a.taliana]]
| + | |
| − | * [[annotation]]:
| + | |
| − | ** [[pathwaytools]]:
| + | |
| − | *** [[original_genome]]
| + | |
| | == External links == | | == External links == |
| − | * RHEA: | + | * UM-BBD-PWY : tyr |
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14761 14761]
| + | {{#set: taxonomic range=TAX-1239}} |
| − | * LIGAND-RXN:
| + | {{#set: taxonomic range=TAX-201174}} |
| − | ** [http://www.genome.jp/dbget-bin/www_bget?R01281 R01281]
| + | {{#set: common name=L-tyrosine degradation II}} |
| − | * UNIPROT:
| + | {{#set: reaction found=1}} |
| − | ** [http://www.uniprot.org/uniprot/P25045 P25045]
| + | {{#set: reaction not found=1}} |
| − | ** [http://www.uniprot.org/uniprot/O15270 O15270]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P48241 P48241]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q09925 Q09925]
| + | |
| − | ** [http://www.uniprot.org/uniprot/P40970 P40970]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9XVI6 Q9XVI6]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q20375 Q20375]
| + | |
| − | ** [http://www.uniprot.org/uniprot/Q9M304 Q9M304]
| + | |
| − | {{#set: direction=LEFT-TO-RIGHT}} | + | |
| − | {{#set: common name=serine palmitoyltransferase, LCB1 subunit}} | + | |
| − | {{#set: common name=serine palmitoyltransferase, LCB2 subunit}} | + | |
| − | {{#set: ec number=EC-2.3.1.50}} | + | |
| − | {{#set: gene associated=CHC_T00008326001|CHC_T00008326001_1|CHC_T00008697001|CHC_T00008697001_1}} | + | |
| − | {{#set: in pathway=PWY-5129|PWY3DJ-12|SPHINGOLIPID-SYN-PWY}}
| + | |
| − | {{#set: reconstruction category=orthology}}
| + | |
| − | {{#set: reconstruction tool=pantograph}}
| + | |
| − | {{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
| + | |
| − | {{#set: reconstruction category=annotation}}
| + | |
| − | {{#set: reconstruction tool=pathwaytools}}
| + | |
| − | {{#set: reconstruction source=original_genome}}
| + | |
