Difference between revisions of "RXN-5472"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....")
 
Line 1: Line 1:
−
[[Category:Pathway]]
+
[[Category:Reaction]]
−
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6352 PWY-6352] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5472 RXN-5472] ==
−
* taxonomic range:
+
* direction:
−
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2759 TAX-2759]
+
** LEFT-TO-RIGHT
−
* common name:
+
* ec number:
−
** 3-phosphoinositide biosynthesis
+
** [http://enzyme.expasy.org/EC/2.4.1.256 EC-2.4.1.256]
 
* Synonym(s):
 
* Synonym(s):
−
** phosphatidylinositol-3,4-bisphosphate biosynthesis
 
−
** phosphatidylinositol 3-phosphate biosynthesis
 
−
** phosphatidylinositol-3,4,5-triphosphate biosynthesis
 
  
−
== Reaction(s) found ==
+
== Reaction Formula ==
−
'''3''' reactions found over '''8''' reactions in the full pathway
+
* With identifiers:
−
* [[1-PHOSPHATIDYLINOSITOL-KINASE-RXN]]
+
** 1 [[CPD-166]][c] '''+''' 1 [[CPD-5170]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[CPD-18076]][c] '''+''' 1 [[DOLICHOLP]][c]
−
* [[2.7.1.68-RXN]]
+
* With common name(s):
−
* [[2.7.8.11-RXN]]
+
** 1 a dolichyl β-D-glucosyl phosphate[c] '''+''' 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 H+[c] '''+''' 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 1 a dolichyl phosphate[c]
−
== Reaction(s) not found ==
+
 
−
* [http://metacyc.org/META/NEW-IMAGE?object=1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN 1-PHOSPHATIDYLINOSITOL-3-KINASE-RXN]
+
== Genes associated with this reaction  ==
−
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.150-RXN 2.7.1.150-RXN]
+
Genes have been associated with this reaction based on different elements listed below.
−
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.153-RXN 2.7.1.153-RXN]
+
* Gene: [[CHC_T00009283001_1]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=2.7.1.154-RXN 2.7.1.154-RXN]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-10938 RXN-10938]
+
== Pathways  ==
 +
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
 +
** '''15''' reactions found over '''19''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
{{#set: taxonomic range=TAX-2759}}
+
* RHEA:
−
{{#set: common name=3-phosphoinositide biosynthesis}}
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29546 29546]
−
{{#set: common name=phosphatidylinositol-3,4-bisphosphate biosynthesis|phosphatidylinositol 3-phosphate biosynthesis|phosphatidylinositol-3,4,5-triphosphate biosynthesis}}
+
* LIGAND-RXN:
−
{{#set: reaction found=3}}
+
** [http://www.genome.jp/dbget-bin/www_bget?R06264 R06264]
−
{{#set: reaction not found=8}}
+
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: completion rate=38.0}}
+
{{#set: ec number=EC-2.4.1.256}}
 +
{{#set: gene associated=CHC_T00009283001_1}}
 +
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
 +
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:18, 23 May 2018

Reaction RXN-5472

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a dolichyl β-D-glucosyl phosphate[c] + 1 α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 H+[c] + 1 α-D-Glc-(1→2)-α-D-Glc-(1→3)-α-D-Glc-(1→3)-α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→2)-α-D-Man-(1→6)]-α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 1 a dolichyl phosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-5472&oldid=13940"