Difference between revisions of "FORMATETHFLIG-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMATETHFLIG-RXN FORMATETHFLIG-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** formate--te...") |
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* [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] | * [[PWY-1722]], formate assimilation into 5,10-methylenetetrahydrofolate: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1722 PWY-1722] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] | * [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841] | ||
** '''8''' reactions found over '''11''' reactions in the full pathway | ** '''8''' reactions found over '''11''' reactions in the full pathway | ||
* [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161] | * [[PWY-2161]], folate polyglutamylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2161 PWY-2161] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| + | * [[CODH-PWY]], reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): [http://metacyc.org/META/NEW-IMAGE?object=CODH-PWY CODH-PWY] | ||
| + | ** '''4''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20221 20221] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P09440 P09440] | ** [http://www.uniprot.org/uniprot/P09440 P09440] | ||
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** [http://www.uniprot.org/uniprot/Q07064 Q07064] | ** [http://www.uniprot.org/uniprot/Q07064 Q07064] | ||
** [http://www.uniprot.org/uniprot/Q27772 Q27772] | ** [http://www.uniprot.org/uniprot/Q27772 Q27772] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R00943 R00943] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=formate--tetrahydrofolate ligase}} | {{#set: common name=formate--tetrahydrofolate ligase}} | ||
{{#set: ec number=EC-6.3.4.3}} | {{#set: ec number=EC-6.3.4.3}} | ||
{{#set: gene associated=CHC_T00009198001|CHC_T00009198001_1}} | {{#set: gene associated=CHC_T00009198001|CHC_T00009198001_1}} | ||
| − | {{#set: in pathway=PWY-2201|PWY-1722 | + | {{#set: in pathway=PWY-2201|PWY-1722|PWY-3841|PWY-2161|CODH-PWY}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:13, 9 January 2019
Contents
Reaction FORMATETHFLIG-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- formate--tetrahydrofolate ligase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 formate[c] + 1 a tetrahydrofolate[c] + 1 ATP[c] => 1 an N10-formyl-tetrahydrofolate[c] + 1 ADP[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009198001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009198001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-2201, folate transformations I: PWY-2201
- 6 reactions found over 12 reactions in the full pathway
- PWY-1722, formate assimilation into 5,10-methylenetetrahydrofolate: PWY-1722
- 3 reactions found over 3 reactions in the full pathway
- PWY-3841, folate transformations II: PWY-3841
- 8 reactions found over 11 reactions in the full pathway
- PWY-2161, folate polyglutamylation: PWY-2161
- 5 reactions found over 5 reactions in the full pathway
- CODH-PWY, reductive acetyl coenzyme A pathway I (homoacetogenic bacteria): CODH-PWY
- 4 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
