Difference between revisions of "FGAMSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FGAMSYN-RXN FGAMSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphoribosylformylgly...") |
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** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] | * [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] | ||
** '''7''' reactions found over '''9''' reactions in the full pathway | ** '''7''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121] | ||
| + | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17129 17129] | ||
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| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/O67691 O67691] | ** [http://www.uniprot.org/uniprot/O67691 O67691] | ||
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** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07] | ** [http://www.uniprot.org/uniprot/Q9ZB07 Q9ZB07] | ||
** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06] | ** [http://www.uniprot.org/uniprot/Q9ZB06 Q9ZB06] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R04463 R04463] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=phosphoribosylformylglycinamidine synthase}} | {{#set: common name=phosphoribosylformylglycinamidine synthase}} | ||
{{#set: ec number=EC-6.3.5.3}} | {{#set: ec number=EC-6.3.5.3}} | ||
{{#set: gene associated=CHC_T00008585001|CHC_T00008585001_1}} | {{#set: gene associated=CHC_T00008585001|CHC_T00008585001_1}} | ||
| − | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-6122|PWY-6277|PWY-6121}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:21, 9 January 2019
Contents
Reaction FGAMSYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- phosphoribosylformylglycinamidine synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 5-P-RIBOSYL-N-FORMYLGLYCINEAMIDE[c] + 1 WATER[c] + 1 ATP[c] + 1 GLN[c] => 1 PROTON[c] + 1 Pi[c] + 1 GLT[c] + 1 ADP[c] + 1 5-PHOSPHORIBOSYL-N-FORMYLGLYCINEAMIDINE[c]
- With common name(s):
- 1 N2-formyl-N1-(5-phospho-β-D-ribosyl)glycinamide[c] + 1 H2O[c] + 1 ATP[c] + 1 L-glutamine[c] => 1 H+[c] + 1 phosphate[c] + 1 L-glutamate[c] + 1 ADP[c] + 1 2-(formamido)-N1-(5-phospho-β-D-ribosyl)acetamidine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00008585001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008585001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
- 5 reactions found over 5 reactions in the full pathway
- PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
- 7 reactions found over 9 reactions in the full pathway
- PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
