Difference between revisions of "CYSTEINE--TRNA-LIGASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=CYSTEINE--TRNA-LIGASE-RXN CYSTEINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CYS-tRNAs]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[ | + | ** 1 [[CYS-tRNAs]][c] '''+''' 1 [[CYS]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[Charged-CYS-tRNAs]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 a tRNAcys[c] '''+''' 1 L-cysteine[c] '''+''' 1 ATP[c] '''=>''' 1 | + | ** 1 a tRNAcys[c] '''+''' 1 L-cysteine[c] '''+''' 1 ATP[c] '''=>''' 1 AMP[c] '''+''' 1 diphosphate[c] '''+''' 1 an L-cysteinyl-[tRNAcys][c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[CHC_T00009398001_1]] | * Gene: [[CHC_T00009398001_1]] | ||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
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** Source: [[annotation-original_genome]] | ** Source: [[annotation-original_genome]] | ||
*** Assignment: AUTOMATED-NAME-MATCH | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00002892001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | * [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY] | ||
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 65: | Line 65: | ||
{{#set: common name=Cysteinyl-tRNA Synthetase}} | {{#set: common name=Cysteinyl-tRNA Synthetase}} | ||
{{#set: ec number=EC-6.1.1.16}} | {{#set: ec number=EC-6.1.1.16}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=CHC_T00009398001_1|CHC_T00009398001|CHC_T00002892001_1}} |
{{#set: in pathway=TRNA-CHARGING-PWY}} | {{#set: in pathway=TRNA-CHARGING-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:51, 9 January 2019
Contents
Reaction CYSTEINE--TRNA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- Cysteinyl-tRNA Synthetase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 a tRNAcys[c] + 1 L-cysteine[c] + 1 ATP[c] => 1 AMP[c] + 1 diphosphate[c] + 1 an L-cysteinyl-[tRNAcys][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009398001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00009398001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00002892001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- LIGAND-RXN:
- UNIPROT:
