Difference between revisions of "ASPARTATE--TRNA-LIGASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARTATE--TRNA-LIGASE-RXN ASPARTATE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...") |
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-galdieria.sulphuraria]] | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 49: | Line 49: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19649 19649] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19649 19649] | ||
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| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P56459 P56459] | ** [http://www.uniprot.org/uniprot/P56459 P56459] | ||
| Line 85: | Line 83: | ||
** [http://www.uniprot.org/uniprot/O74407 O74407] | ** [http://www.uniprot.org/uniprot/O74407 O74407] | ||
** [http://www.uniprot.org/uniprot/O07683 O07683] | ** [http://www.uniprot.org/uniprot/O07683 O07683] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R05577 R05577] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=aspartyl-tRNA synthetase}} | {{#set: common name=aspartyl-tRNA synthetase}} | ||
| Line 92: | Line 92: | ||
{{#set: in pathway=TRNA-CHARGING-PWY}} | {{#set: in pathway=TRNA-CHARGING-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:09, 9 January 2019
Contents
Reaction ASPARTATE--TRNA-LIGASE-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- aspartyl-tRNA synthetase
- Aspartate--tRNA ligase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ASPARTATE[c] + 1 ATP[c] + 1 ASP-tRNAs[c] => 1 PPI[c] + 1 AMP[c] + 1 Charged-ASP-tRNAs[c]
- With common name(s):
- 1 L-aspartate[c] + 1 ATP[c] + 1 tRNAasp[c] => 1 diphosphate[c] + 1 AMP[c] + 1 an L-aspartyl-[tRNAasp][c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00004955001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00004944001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00003476001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00009433001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00010226001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00010226001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009433001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
Pathways
- TRNA-CHARGING-PWY, tRNA charging: TRNA-CHARGING-PWY
- 21 reactions found over 21 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
