Difference between revisions of "CHC T00008988001"

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(Created page with "Category:Gene == Gene CHC_T00008917001 == * left end position: ** 39809 * transcription direction: ** NEGATIVE * right end position: ** 41476 * centisome position: ** 9.47...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] == * direction: ** LEFT-TO-RIGHT * common name: ** carbamoyl phosphate synthas...")
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[[Category:Gene]]
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[[Category:Reaction]]
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== Gene CHC_T00008917001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-13202 RXN-13202] ==
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* left end position:
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* direction:
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** 39809
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** LEFT-TO-RIGHT
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* transcription direction:
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* common name:
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** NEGATIVE
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** carbamoyl phosphate synthase small subunit
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* right end position:
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* ec number:
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** 41476
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** [http://enzyme.expasy.org/EC/6.3.4.16 EC-6.3.4.16]
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* centisome position:
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** 9.478152   
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* Synonym(s):
 
* Synonym(s):
  
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== Reactions associated ==
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== Reaction Formula ==
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* [[LYSINE--TRNA-LIGASE-RXN]]
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* With identifiers:
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** original_genome
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** 1 [[HCO3]][c] '''+''' 1 [[AMMONIUM]][c] '''+''' 2 [[ATP]][c] '''=>''' 1 [[CARBAMOYL-P]][c] '''+''' 2 [[PROTON]][c] '''+''' 1 [[Pi]][c] '''+''' 2 [[ADP]][c]
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***automated-name-match
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* With common name(s):
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== Pathways associated ==
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** 1 hydrogencarbonate[c] '''+''' 1 ammonium[c] '''+''' 2 ATP[c] '''=>''' 1 carbamoyl phosphate[c] '''+''' 2 H+[c] '''+''' 1 phosphate[c] '''+''' 2 ADP[c]
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* [[TRNA-CHARGING-PWY]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_70]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00010056001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008596001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways ==
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* [[PWY-4984]], urea cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-4984 PWY-4984]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
 
== External links  ==
 
== External links  ==
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{{#set: left end position=39809}}
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* RHEA:
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{{#set: transcription direction=NEGATIVE}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10624 10624]
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{{#set: right end position=41476}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=18030 18030]
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{{#set: centisome position=9.478152    }}
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* LIGAND-RXN:
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{{#set: reaction associated=LYSINE--TRNA-LIGASE-RXN}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00149 R00149]
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{{#set: pathway associated=TRNA-CHARGING-PWY}}
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* UNIPROT:
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** [http://www.uniprot.org/uniprot/O15829 O15829]
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** [http://www.uniprot.org/uniprot/O15830 O15830]
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** [http://www.uniprot.org/uniprot/P07756 P07756]
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** [http://www.uniprot.org/uniprot/P31327 P31327]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=carbamoyl phosphate synthase small subunit}}
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{{#set: ec number=EC-6.3.4.16}}
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{{#set: gene associated=CHC_70|CHC_T00010056001_1|CHC_T00008596001_1}}
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{{#set: in pathway=PWY-4984}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}

Revision as of 11:00, 18 January 2018

Reaction RXN-13202

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • carbamoyl phosphate synthase small subunit
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hydrogencarbonate[c] + 1 ammonium[c] + 2 ATP[c] => 1 carbamoyl phosphate[c] + 2 H+[c] + 1 phosphate[c] + 2 ADP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4984, urea cycle: PWY-4984
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links






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