Difference between revisions of "IGPSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=IGPSYN-RXN IGPSYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** indole-3-glycerol phospha...") |
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== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 45: | Line 45: | ||
* RHEA: | * RHEA: | ||
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23476 23476] | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=23476 23476] | ||
| − | |||
| − | |||
* UNIPROT: | * UNIPROT: | ||
** [http://www.uniprot.org/uniprot/P42393 P42393] | ** [http://www.uniprot.org/uniprot/P42393 P42393] | ||
| Line 78: | Line 76: | ||
** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7] | ** [http://www.uniprot.org/uniprot/Q9ZFA7 Q9ZFA7] | ||
** [http://www.uniprot.org/uniprot/P94327 P94327] | ** [http://www.uniprot.org/uniprot/P94327 P94327] | ||
| + | * LIGAND-RXN: | ||
| + | ** [http://www.genome.jp/dbget-bin/www_bget?R03508 R03508] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=indole-3-glycerol phosphate synthase}} | {{#set: common name=indole-3-glycerol phosphate synthase}} | ||
| Line 84: | Line 84: | ||
{{#set: in pathway=TRPSYN-PWY}} | {{#set: in pathway=TRPSYN-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus | + | {{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 17:45, 9 January 2019
Contents
Reaction IGPSYN-RXN
- direction:
- LEFT-TO-RIGHT
- common name:
- indole-3-glycerol phosphate synthase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTON[c] + 1 CARBOXYPHENYLAMINO-DEOXYRIBULOSE-P[c] => 1 INDOLE-3-GLYCEROL-P[c] + 1 WATER[c] + 1 CARBON-DIOXIDE[c]
- With common name(s):
- 1 H+[c] + 1 1-(o-carboxyphenylamino)-1'-deoxyribulose 5'-phosphate[c] => 1 (1S,2R)-1-C-(indol-3-yl)glycerol 3-phosphate[c] + 1 H2O[c] + 1 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00000220001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00004489001_1
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00008561001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00008561001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Source: orthology-arabidopsis_thaliana
Pathways
- TRPSYN-PWY, L-tryptophan biosynthesis: TRPSYN-PWY
- 6 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
- RHEA:
- UNIPROT:
- LIGAND-RXN:
