Difference between revisions of "UDPREDUCT-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDPREDUCT-RXN UDPREDUCT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonucleoside-diph...")
 
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== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[CHC_T00008864001]]
+
* Gene: [[CHC_T00008926001]]
 
** Source: [[annotation-original_genome]]
 
** Source: [[annotation-original_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[CHC_T00008864001_1]]
+
* Gene: [[CHC_T00008926001_1]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[CHC_T00008926001]]
+
* Gene: [[CHC_T00008864001]]
 
** Source: [[annotation-original_genome]]
 
** Source: [[annotation-original_genome]]
 
*** Assignment: AUTOMATED-NAME-MATCH
 
*** Assignment: AUTOMATED-NAME-MATCH
−
* Gene: [[CHC_T00008926001_1]]
+
* Gene: [[CHC_T00008864001_1]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-galdieria.sulphuraria]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 
−
** '''9''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 
−
** '''8''' reactions found over '''9''' reactions in the full pathway
 
 
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 
* [[PWY0-166]], superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-166 PWY0-166]
 
** '''12''' reactions found over '''17''' reactions in the full pathway
 
** '''12''' reactions found over '''17''' reactions in the full pathway
 +
* [[PWY-6545]], pyrimidine deoxyribonucleotides de novo biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6545 PWY-6545]
 +
** '''8''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-7184]], pyrimidine deoxyribonucleotides de novo biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7184 PWY-7184]
 +
** '''9''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-galdieria.sulphuraria]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
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{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
 
{{#set: common name=ribonucleoside-diphosphate reductase beta chain}}
 
{{#set: ec number=EC-1.17.4.1}}
 
{{#set: ec number=EC-1.17.4.1}}
−
{{#set: gene associated=CHC_T00008864001|CHC_T00008864001_1|CHC_T00008926001|CHC_T00008926001_1}}
+
{{#set: gene associated=CHC_T00008926001|CHC_T00008926001_1|CHC_T00008864001|CHC_T00008864001_1}}
−
{{#set: in pathway=PWY-7184|PWY-6545|PWY0-166}}
+
{{#set: in pathway=PWY0-166|PWY-6545|PWY-7184}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria|annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 17:02, 9 January 2019

Reaction UDPREDUCT-RXN

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • ribonucleoside-diphosphate reductase alpha chain
    • ribonucleoside-diphosphate reductase beta chain
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 UDP[c] + 1 a reduced thioredoxin[c] => 1 H2O[c] + 1 an oxidized thioredoxin[c] + 1 dUDP[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY0-166, superpathway of pyrimidine deoxyribonucleotides de novo biosynthesis (E. coli): PWY0-166
    • 12 reactions found over 17 reactions in the full pathway
  • PWY-6545, pyrimidine deoxyribonucleotides de novo biosynthesis III: PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7184, pyrimidine deoxyribonucleotides de novo biosynthesis I: PWY-7184
    • 9 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=UDPREDUCT-RXN&oldid=22603"