Difference between revisions of "CHC T00006146001 1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN] == * direction:...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-DEIMINASE-RXN ARGININE-DEIMINASE-RXN] == * direction: ** REVERSIBLE * ec number: ** [http:...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN PLASTOQUINOL--PLASTOCYANIN-REDUCTASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-DEIMINASE-RXN ARGININE-DEIMINASE-RXN] ==
 
* direction:
 
* direction:
−
** LEFT-TO-RIGHT
+
** REVERSIBLE
−
* common name:
+
−
** Cytochrome b6-f complex subunit IV
+
−
** cytochrome b6-f complex subunit VIII
+
−
** cytochrome b6-f complex subunit VI
+
−
** cytochrome b6-f complex subunit VII
+
−
** cytochrome b6-f complex subunit petP
+
−
** cytochrome b6/f complex subunit V
+
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/1.10.9.1 EC-1.10.9.1]
+
** [http://enzyme.expasy.org/EC/3.5.3.6 EC-3.5.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[PROTON]][e] '''+''' 1 [[Plastoquinols]][c] '''+''' 2 [[Oxidized-Plastocyanins]][c] '''=>''' 2 [[Plastocyanin-Reduced]][c] '''+''' 1 [[PLASTOQUINONE]][c] '''+''' 4 [[PROTON]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[ARG]][c] '''<=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[L-CITRULLINE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 H+[e] '''+''' 1 a plastoquinol[c] '''+''' 2 an oxidized plastocyanin[c] '''=>''' 2 a reduced plastocyanin[c] '''+''' 1 a plastoquinone[c] '''+''' 4 H+[c]
+
** 1 H2O[c] '''+''' 1 L-arginine[c] '''<=>''' 1 ammonium[c] '''+''' 1 L-citrulline[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_680]]
+
* [[CHC_T00008387001_1]]
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_620]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_675]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_920]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_310]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00007954001_1]]
+
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
−
* [[CHC_645]]
 
−
** ORIGINAL_GENOME
 
−
***AUTOMATED-NAME-MATCH
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-101]], photosynthesis light reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY-101 PWY-101]
+
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981]
−
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''4''' reactions found over '''6''' reactions in the full pathway
 +
* [[ARGDEGRAD-PWY]], L-arginine degradation V (arginine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEGRAD-PWY ARGDEGRAD-PWY]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
−
* [[annotation]]:
 
−
** [[pathwaytools]]:
 
−
*** [[original_genome]]
 
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19597 19597]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R03817 R03817]
+
** [http://www.genome.jp/dbget-bin/www_bget?R00552 R00552]
 
* UNIPROT:
 
* UNIPROT:
−
** [http://www.uniprot.org/uniprot/P12120 P12120]
+
** [http://www.uniprot.org/uniprot/P23793 P23793]
−
** [http://www.uniprot.org/uniprot/P06669 P06669]
+
** [http://www.uniprot.org/uniprot/P58013 P58013]
−
** [http://www.uniprot.org/uniprot/P12122 P12122]
+
** [http://www.uniprot.org/uniprot/P13981 P13981]
−
** [http://www.uniprot.org/uniprot/P69457 P69457]
+
** [http://www.uniprot.org/uniprot/P75218 P75218]
−
** [http://www.uniprot.org/uniprot/P49728 P49728]
+
** [http://www.uniprot.org/uniprot/Q48294 Q48294]
−
** [http://www.uniprot.org/uniprot/P27589 P27589]
+
** [http://www.uniprot.org/uniprot/Q27657 Q27657]
−
** [http://www.uniprot.org/uniprot/P13347 P13347]
+
** [http://www.uniprot.org/uniprot/O53088 O53088]
−
** [http://www.uniprot.org/uniprot/P06248 P06248]
+
{{#set: direction=REVERSIBLE}}
−
** [http://www.uniprot.org/uniprot/P06247 P06247]
+
{{#set: ec number=EC-3.5.3.6}}
−
** [http://www.uniprot.org/uniprot/P12123 P12123]
+
{{#set: gene associated=CHC_T00008387001_1}}
−
** [http://www.uniprot.org/uniprot/P00165 P00165]
+
{{#set: in pathway=PWY-4981|ARGDEGRAD-PWY}}
−
** [http://www.uniprot.org/uniprot/P05642 P05642]
+
−
** [http://www.uniprot.org/uniprot/P06246 P06246]
+
−
** [http://www.uniprot.org/uniprot/P06449 P06449]
+
−
** [http://www.uniprot.org/uniprot/P00155 P00155]
+
−
** [http://www.uniprot.org/uniprot/P07888 P07888]
+
−
** [http://www.uniprot.org/uniprot/P12361 P12361]
+
−
** [http://www.uniprot.org/uniprot/Q9ZR03 Q9ZR03]
+
−
** [http://www.uniprot.org/uniprot/P16013 P16013]
+
−
** [http://www.uniprot.org/uniprot/P04658 P04658]
+
−
** [http://www.uniprot.org/uniprot/P08980 P08980]
+
−
** [http://www.uniprot.org/uniprot/P11093 P11093]
+
−
** [http://www.uniprot.org/uniprot/P14236 P14236]
+
−
** [http://www.uniprot.org/uniprot/P05151 P05151]
+
−
** [http://www.uniprot.org/uniprot/P06527 P06527]
+
−
** [http://www.uniprot.org/uniprot/P60161 P60161]
+
−
** [http://www.uniprot.org/uniprot/P60162 P60162]
+
−
** [http://www.uniprot.org/uniprot/P12119 P12119]
+
−
** [http://www.uniprot.org/uniprot/P26290 P26290]
+
−
** [http://www.uniprot.org/uniprot/P26287 P26287]
+
−
** [http://www.uniprot.org/uniprot/P23577 P23577]
+
−
** [http://www.uniprot.org/uniprot/P23230 P23230]
+
−
** [http://www.uniprot.org/uniprot/P30398 P30398]
+
−
** [http://www.uniprot.org/uniprot/Q00471 Q00471]
+
−
** [http://www.uniprot.org/uniprot/P28058 P28058]
+
−
** [http://www.uniprot.org/uniprot/P28059 P28059]
+
−
** [http://www.uniprot.org/uniprot/P30361 P30361]
+
−
** [http://www.uniprot.org/uniprot/P30396 P30396]
+
−
** [http://www.uniprot.org/uniprot/P26291 P26291]
+
−
** [http://www.uniprot.org/uniprot/Q08362 Q08362]
+
−
** [http://www.uniprot.org/uniprot/P31480 P31480]
+
−
** [http://www.uniprot.org/uniprot/Q46136 Q46136]
+
−
** [http://www.uniprot.org/uniprot/P36438 P36438]
+
−
** [http://www.uniprot.org/uniprot/P46304 P46304]
+
−
** [http://www.uniprot.org/uniprot/P46617 P46617]
+
−
** [http://www.uniprot.org/uniprot/P05643 P05643]
+
−
** [http://www.uniprot.org/uniprot/P69454 P69454]
+
−
** [http://www.uniprot.org/uniprot/P51318 P51318]
+
−
** [http://www.uniprot.org/uniprot/P51341 P51341]
+
−
** [http://www.uniprot.org/uniprot/P74149 P74149]
+
−
** [http://www.uniprot.org/uniprot/P74174 P74174]
+
−
** [http://www.uniprot.org/uniprot/Q57038 Q57038]
+
−
** [http://www.uniprot.org/uniprot/P74714 P74714]
+
−
** [http://www.uniprot.org/uniprot/P49488 P49488]
+
−
** [http://www.uniprot.org/uniprot/P49489 P49489]
+
−
** [http://www.uniprot.org/uniprot/P49470 P49470]
+
−
** [http://www.uniprot.org/uniprot/P49476 P49476]
+
−
** [http://www.uniprot.org/uniprot/O48611 O48611]
+
−
** [http://www.uniprot.org/uniprot/P49161 P49161]
+
−
** [http://www.uniprot.org/uniprot/P48122 P48122]
+
−
** [http://www.uniprot.org/uniprot/P48121 P48121]
+
−
** [http://www.uniprot.org/uniprot/P48123 P48123]
+
−
** [http://www.uniprot.org/uniprot/P56322 P56322]
+
−
** [http://www.uniprot.org/uniprot/P56321 P56321]
+
−
** [http://www.uniprot.org/uniprot/P56305 P56305]
+
−
** [http://www.uniprot.org/uniprot/P56306 P56306]
+
−
** [http://www.uniprot.org/uniprot/P41614 P41614]
+
−
** [http://www.uniprot.org/uniprot/P41619 P41619]
+
−
** [http://www.uniprot.org/uniprot/P41628 P41628]
+
−
** [http://www.uniprot.org/uniprot/P52770 P52770]
+
−
** [http://www.uniprot.org/uniprot/P69460 P69460]
+
−
** [http://www.uniprot.org/uniprot/O47042 O47042]
+
−
** [http://www.uniprot.org/uniprot/O47043 O47043]
+
−
** [http://www.uniprot.org/uniprot/O47044 O47044]
+
−
** [http://www.uniprot.org/uniprot/Q9ZGG1 Q9ZGG1]
+
−
** [http://www.uniprot.org/uniprot/Q9ZGG0 Q9ZGG0]
+
−
** [http://www.uniprot.org/uniprot/P13348 P13348]
+
−
** [http://www.uniprot.org/uniprot/P06250 P06250]
+
−
** [http://www.uniprot.org/uniprot/P12118 P12118]
+
−
** [http://www.uniprot.org/uniprot/P69459 P69459]
+
−
** [http://www.uniprot.org/uniprot/P00166 P00166]
+
−
{{#set: direction=LEFT-TO-RIGHT}}
+
−
{{#set: common name=Cytochrome b6-f complex subunit IV}}
+
−
{{#set: common name=cytochrome b6-f complex subunit VIII}}
+
−
{{#set: common name=cytochrome b6-f complex subunit VI}}
+
−
{{#set: common name=cytochrome b6-f complex subunit VII}}
+
−
{{#set: common name=cytochrome b6-f complex subunit petP}}
+
−
{{#set: common name=cytochrome b6/f complex subunit V}}
+
−
{{#set: ec number=EC-1.10.9.1}}
+
−
{{#set: gene associated=CHC_680|CHC_620|CHC_675|CHC_920|CHC_310|CHC_T00007954001_1|CHC_645}}
+
−
{{#set: in pathway=PWY-101}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Revision as of 12:05, 18 January 2018

Reaction ARGININE-DEIMINASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 L-arginine[c] <=> 1 ammonium[c] + 1 L-citrulline[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
    • 4 reactions found over 6 reactions in the full pathway
  • ARGDEGRAD-PWY, L-arginine degradation V (arginine deiminase pathway): ARGDEGRAD-PWY
    • 2 reactions found over 3 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00006146001_1&oldid=6339"