Difference between revisions of "CPD-17281"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] == * direction: ** LEFT-TO-RIGHT * common name: ** pyruvate dehydrogenase E1 a...")
 
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14424 CPD-14424] == * smiles: ** CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C...")
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[[Category:Reaction]]
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[[Category:Metabolite]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-1134 RXN0-1134] ==
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-14424 CPD-14424] ==
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* direction:
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* smiles:
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** LEFT-TO-RIGHT
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** CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
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* inchi key:
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** InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J
 
* common name:
 
* common name:
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** pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor
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** (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA
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* ec number:
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* molecular weight:
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** [http://enzyme.expasy.org/EC/1.2.4.1 EC-1.2.4.1]
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** 1091.996   
 
* Synonym(s):
 
* Synonym(s):
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** (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA
  
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== Reaction Formula ==
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== Reaction(s) known to consume the compound ==
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* With identifiers:
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* [[RXN-13444]]
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** 1 [[PROTON]][c] '''+''' 1 [[PYRUVATE]][c] '''+''' 1 [[Pyruvate-dehydrogenase-lipoate]][c] '''=>''' 1 [[Pyruvate-dehydrogenase-acetylDHlipoyl]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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== Reaction(s) known to produce the compound ==
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* With common name(s):
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* [[RXN-13443]]
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** 1 H+[c] '''+''' 1 pyruvate[c] '''+''' 1 a [pyruvate dehydrogenase E2 protein] N6-lipoyl-L-lysine[c] '''=>''' 1 a [pyruvate dehydrogenase E2 protein] N6-S-acetyldihydrolipoyl-L-lysine[c] '''+''' 1 CO2[c]
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== Reaction(s) of unknown directionality ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00008732001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008442001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_T00008732001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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== Pathways  ==
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* [[PYRUVDEHYD-PWY]], pyruvate decarboxylation to acetyl CoA: [http://metacyc.org/META/NEW-IMAGE?object=PYRUVDEHYD-PWY PYRUVDEHYD-PWY]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* LIGAND-RXN:
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* PUBCHEM:
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** [http://www.genome.jp/dbget-bin/www_bget?R01699 R01699]
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=72551548 72551548]
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* UNIPROT:
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* CHEBI:
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** [http://www.uniprot.org/uniprot/P06959 P06959]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=76460 76460]
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** [http://www.uniprot.org/uniprot/P26267 P26267]
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{{#set: smiles=CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]}}
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** [http://www.uniprot.org/uniprot/P35485 P35485]
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{{#set: inchi key=InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J}}
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** [http://www.uniprot.org/uniprot/Q59097 Q59097]
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/Q9N1X8 Q9N1X8]
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{{#set: molecular weight=1091.996    }}
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** [http://www.uniprot.org/uniprot/P45119 P45119]
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{{#set: common name=(5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA}}
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** [http://www.uniprot.org/uniprot/P11966 P11966]
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{{#set: consumed by=RXN-13444}}
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** [http://www.uniprot.org/uniprot/P35488 P35488]
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{{#set: produced by=RXN-13443}}
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** [http://www.uniprot.org/uniprot/P47515 P47515]
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** [http://www.uniprot.org/uniprot/P21882 P21882]
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** [http://www.uniprot.org/uniprot/P47516 P47516]
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** [http://www.uniprot.org/uniprot/P21881 P21881]
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** [http://www.uniprot.org/uniprot/P21873 P21873]
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** [http://www.uniprot.org/uniprot/P16387 P16387]
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** [http://www.uniprot.org/uniprot/P0AFG8 P0AFG8]
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** [http://www.uniprot.org/uniprot/P08559 P08559]
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** [http://www.uniprot.org/uniprot/P11177 P11177]
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** [http://www.uniprot.org/uniprot/P29803 P29803]
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** [http://www.uniprot.org/uniprot/P29804 P29804]
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** [http://www.uniprot.org/uniprot/P26284 P26284]
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** [http://www.uniprot.org/uniprot/Q9JU08 Q9JU08]
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** [http://www.uniprot.org/uniprot/Q9CJD6 Q9CJD6]
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** [http://www.uniprot.org/uniprot/Q9JU07 Q9JU07]
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** [http://www.uniprot.org/uniprot/Q9CJD5 Q9CJD5]
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** [http://www.uniprot.org/uniprot/Q09171 Q09171]
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** [http://www.uniprot.org/uniprot/P52901 P52901]
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** [http://www.uniprot.org/uniprot/P79931 P79931]
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** [http://www.uniprot.org/uniprot/P79932 P79932]
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** [http://www.uniprot.org/uniprot/Q9D051 Q9D051]
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** [http://www.uniprot.org/uniprot/P10801 P10801]
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** [http://www.uniprot.org/uniprot/P21874 P21874]
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** [http://www.uniprot.org/uniprot/P49432 P49432]
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** [http://www.uniprot.org/uniprot/Q59820 Q59820]
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** [http://www.uniprot.org/uniprot/P35486 P35486]
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** [http://www.uniprot.org/uniprot/P35487 P35487]
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** [http://www.uniprot.org/uniprot/Q06437 Q06437]
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** [http://www.uniprot.org/uniprot/P32473 P32473]
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** [http://www.uniprot.org/uniprot/Q59107 Q59107]
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** [http://www.uniprot.org/uniprot/P73405 P73405]
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** [http://www.uniprot.org/uniprot/Q49109 Q49109]
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** [http://www.uniprot.org/uniprot/O48685 O48685]
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** [http://www.uniprot.org/uniprot/P52902 P52902]
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** [http://www.uniprot.org/uniprot/P52904 P52904]
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** [http://www.uniprot.org/uniprot/P52903 P52903]
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** [http://www.uniprot.org/uniprot/O66112 O66112]
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** [http://www.uniprot.org/uniprot/Q9Y8I5 Q9Y8I5]
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** [http://www.uniprot.org/uniprot/Q9Y8I6 Q9Y8I6]
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** [http://www.uniprot.org/uniprot/O69478 O69478]
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** [http://www.uniprot.org/uniprot/P10802 P10802]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=pyruvate dehydrogenase E1 alpha subunit, mitochondrial precursor}}
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{{#set: ec number=EC-1.2.4.1}}
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{{#set: gene associated=CHC_T00008732001|CHC_T00008442001_1|CHC_T00008732001_1}}
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{{#set: in pathway=PYRUVDEHYD-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 12:11, 18 January 2018

Metabolite CPD-14424

  • smiles:
    • CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-]
  • inchi key:
    • InChIKey=KIDYDCLNVXONEF-PYBSMVOOSA-J
  • common name:
    • (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosapentaenoyl-CoA
  • molecular weight:
    • 1091.996
  • Synonym(s):
    • (5Z,8Z,11Z,14Z,17Z)-3R-hydroxy-docosa-5,8,11,14,17-pentaenoyl-CoA

Reaction(s) known to consume the compound

Reaction(s) known to produce the compound

Reaction(s) of unknown directionality

External links

"CCC=CCC=CCC=CCC=CCC=CCCCC(O)CC(=O)SCCNC(=O)CCNC(=O)C(O)C(C)(C)COP(=O)(OP(=O)(OCC1(C(OP([O-])(=O)[O-])C(O)C(O1)N3(C2(=C(C(N)=NC=N2)N=C3))))[O-])[O-" cannot be used as a page name in this wiki.




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