Difference between revisions of "CITRULLINE-DEG-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] == * direction: ** REVERSIBLE * common name: ** cis-aconitate...")
 
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-30...")
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Pathway]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACONITATEHYDR-RXN ACONITATEHYDR-RXN] ==
+
== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] ==
−
* direction:
+
* taxonomic range:
−
** REVERSIBLE
+
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-3041 TAX-3041]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2763 TAX-2763]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-287987 TAX-287987]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5204 TAX-5204]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2836 TAX-2836]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4762 TAX-4762]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4890 TAX-4890]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-5794 TAX-5794]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
 +
** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2]
 
* common name:
 
* common name:
−
** cis-aconitate hydratase
+
** 3-dehydroquinate biosynthesis I
−
** Aconitate hydratase, mitochondrial
+
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reaction(s) found ==
−
* With identifiers:
+
* '''2''' reaction(s) found
−
** 1 [[WATER]][c] '''+''' 1 [[CIS-ACONITATE]][c] '''<=>''' 1 [[THREO-DS-ISO-CITRATE]][c]
+
** [[DAHPSYN-RXN]]
−
* With common name(s):
+
** [[3-DEHYDROQUINATE-SYNTHASE-RXN]]
−
** 1 H2O[c] '''+''' 1 cis-aconitate[c] '''<=>''' 1 D-threo-isocitrate[c]
+
== Reaction(s) not found ==
−
 
+
* '''0''' reaction(s) not found
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00008781001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00008781001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
== Pathways  ==
+
−
* [[FERMENTATION-PWY]], mixed acid fermentation: [http://metacyc.org/META/NEW-IMAGE?object=FERMENTATION-PWY FERMENTATION-PWY]
+
−
** '''11''' reactions found over '''16''' reactions in the full pathway
+
−
* [[PWY-5913]], partial TCA cycle (obligate autotrophs): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5913 PWY-5913]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[PWY-5690]], TCA cycle II (plants and fungi): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5690 PWY-5690]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-6549]], L-glutamine biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6549 PWY-6549]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-5392]], reductive TCA cycle II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5392 PWY-5392]
+
−
** '''5''' reactions found over '''12''' reactions in the full pathway
+
−
* [[P23-PWY]], reductive TCA cycle I: [http://metacyc.org/META/NEW-IMAGE?object=P23-PWY P23-PWY]
+
−
** '''9''' reactions found over '''12''' reactions in the full pathway
+
−
* [[P105-PWY]], TCA cycle IV (2-oxoglutarate decarboxylase): [http://metacyc.org/META/NEW-IMAGE?object=P105-PWY P105-PWY]
+
−
** '''8''' reactions found over '''11''' reactions in the full pathway
+
−
* [[GLYOXYLATE-BYPASS]], glyoxylate cycle: [http://metacyc.org/META/NEW-IMAGE?object=GLYOXYLATE-BYPASS GLYOXYLATE-BYPASS]
+
−
** '''4''' reactions found over '''6''' reactions in the full pathway
+
−
* [[PWY-6969]], TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6969 PWY-6969]
+
−
** '''8''' reactions found over '''12''' reactions in the full pathway
+
−
* [[PWY-6728]], methylaspartate cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728]
+
−
** '''9''' reactions found over '''18''' reactions in the full pathway
+
−
* [[REDCITCYC]], TCA cycle VIII (helicobacter): [http://metacyc.org/META/NEW-IMAGE?object=REDCITCYC REDCITCYC]
+
−
** '''5''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7254]], TCA cycle VII (acetate-producers): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7254 PWY-7254]
+
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
−
* [[PWY-7124]], ethylene biosynthesis V (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7124 PWY-7124]
+
−
** '''8''' reactions found over '''10''' reactions in the full pathway
+
−
* [[PWY66-398]], TCA cycle III (animals): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-398 PWY66-398]
+
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
−
* [[TCA]], TCA cycle I (prokaryotic): [http://metacyc.org/META/NEW-IMAGE?object=TCA TCA]
+
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
* ECOCYC:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22144 22144]
+
** [http://metacyc.org/ECOLI/NEW-IMAGE?object=PWY-6164 PWY-6164]
−
* LIGAND-RXN:
+
{{#set: taxonomic range=TAX-3041}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R01900 R01900]
+
{{#set: taxonomic range=TAX-2763}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: taxonomic range=TAX-287987}}
−
{{#set: common name=cis-aconitate hydratase}}
+
{{#set: taxonomic range=TAX-5204}}
−
{{#set: common name=Aconitate hydratase, mitochondrial}}
+
{{#set: taxonomic range=TAX-2836}}
−
{{#set: gene associated=CHC_T00008781001|CHC_T00008781001_1}}
+
{{#set: taxonomic range=TAX-4762}}
−
{{#set: in pathway=FERMENTATION-PWY|PWY-5913|PWY-5690|PWY-6549|PWY-5392|P23-PWY|P105-PWY|GLYOXYLATE-BYPASS|PWY-6969|PWY-6728|REDCITCYC|PWY-7254|PWY-7124|PWY66-398|TCA}}
+
{{#set: taxonomic range=TAX-4890}}
−
{{#set: reconstruction category=orthology}}
+
{{#set: taxonomic range=TAX-5794}}
−
{{#set: reconstruction tool=pantograph}}
+
{{#set: taxonomic range=TAX-33090}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
{{#set: taxonomic range=TAX-2}}
−
{{#set: reconstruction category=annotation}}
+
{{#set: common name=3-dehydroquinate biosynthesis I}}
−
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reaction found=2}}
−
{{#set: reconstruction source=original_genome}}
+
{{#set: reaction not found=0}}

Revision as of 11:12, 18 January 2018

Pathway PWY-6164

Reaction(s) found

Reaction(s) not found

  • 0 reaction(s) not found

External links







Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CITRULLINE-DEG-PWY&oldid=6916"