Difference between revisions of "PROUT-PWY"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14919 RXN-14919] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10707 RXN-10707] == * direction: ** LEFT-TO-RIGHT * common name: ** acyl-CoA oxidase * ec numbe...")
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14919 RXN-14919] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10707 RXN-10707] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* common name:
 +
** acyl-CoA oxidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.1.1.95 EC-2.1.1.95]
+
** [http://enzyme.expasy.org/EC/1.3.3.6 EC-1.3.3.6]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[CPD-15839]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[CPD-15837]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[CPD-11525]][c] '''=>''' 1 [[CPD-11526]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 S-adenosyl-L-methionine[c] '''+''' 1 δ-tocotrienol[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 β-tocotrienol[c]
+
** 1 oxygen[c] '''+''' 1 OPC4-CoA[c] '''=>''' 1 OPC4-trans-2-enoyl-CoA[c] '''+''' 1 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00000837001_1]]
+
* [[CHC_T00008400001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00007910001_1]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00009142001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008400001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00008935001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00008935001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 +
* [[CHC_T00008478001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00009531001_1]]
 +
** [[pantograph]]-[[galdieria.sulphuraria]]
 +
* [[CHC_T00009531001]]
 +
** ORIGINAL_GENOME
 +
***AUTOMATED-NAME-MATCH
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-7436]], vitamin E biosynthesis (tocotrienols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7436 PWY-7436]
+
* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''13''' reactions found over '''19''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* [[orthology]]:
 
* [[orthology]]:
 
** [[pantograph]]:
 
** [[pantograph]]:
 
*** [[galdieria.sulphuraria]]
 
*** [[galdieria.sulphuraria]]
 +
* [[annotation]]:
 +
** [[pathwaytools]]:
 +
*** [[original_genome]]
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-2.1.1.95}}
+
{{#set: common name=acyl-CoA oxidase}}
−
{{#set: gene associated=CHC_T00000837001_1}}
+
{{#set: ec number=EC-1.3.3.6}}
−
{{#set: in pathway=PWY-7436}}
+
{{#set: gene associated=CHC_T00008400001|CHC_T00007910001_1|CHC_T00009142001|CHC_T00008400001_1|CHC_T00008935001_1|CHC_T00008935001|CHC_T00008478001_1|CHC_T00009531001_1|CHC_T00009531001}}
 +
{{#set: in pathway=PWY-735}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
 
{{#set: reconstruction source=galdieria.sulphuraria}}
 +
{{#set: reconstruction category=annotation}}
 +
{{#set: reconstruction tool=pathwaytools}}
 +
{{#set: reconstruction source=original_genome}}

Revision as of 11:24, 18 January 2018

Reaction RXN-10707

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • acyl-CoA oxidase
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-735, jasmonic acid biosynthesis: PWY-735
    • 13 reactions found over 19 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PROUT-PWY&oldid=7894"