Difference between revisions of "GCVP-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.o...")
 
(Created page with "Category:Gene == Gene CHC_T00008428001 == * left end position: ** 4551 * transcription direction: ** POSITIVE * right end position: ** 5378 * centisome position: ** 1.5779...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=2.7.8.15-RXN 2.7.8.15-RXN] ==
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== Gene CHC_T00008428001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 4551
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* ec number:
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* transcription direction:
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** [http://enzyme.expasy.org/EC/2.7.8.15 EC-2.7.8.15]
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** POSITIVE
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* right end position:
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** 5378
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* centisome position:
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** 1.5779455   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[PHOSPHAGLYPSYN-RXN]]
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** 1 [[DOLICHOLP]][c] '''+''' 1 [[UDP-N-ACETYL-D-GLUCOSAMINE]][c] '''=>''' 1 [[CPD-190]][c] '''+''' 1 [[UMP]][c]
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** original_genome
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* With common name(s):
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***automated-name-match
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** 1 a dolichyl phosphate[c] '''+''' 1 UDP-N-acetyl-α-D-glucosamine[c] '''=>''' 1 N-acetyl-α-D-glucosaminyl-diphosphodolichol[c] '''+''' 1 UMP[c]
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== Pathways associated ==
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* [[PWY4FS-7]]
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== Genes associated with this reaction  ==
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* [[PWY4FS-8]]
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Genes have been associated with this reaction based on different elements listed below.
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* [[PWY-5269]]
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* [[CHC_T00006227001_1]]
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* [[PWY-7817]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[PWY-5668]]
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** [[pantograph]]-[[a.taliana]]
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* [[PWY0-1545]]
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* [[CHC_T00007237001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** [[pantograph]]-[[a.taliana]]
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== Pathways  ==
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* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic, high mannose): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]
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** '''12''' reactions found over '''19''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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*** [[a.taliana]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=4551}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=13289 13289]
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{{#set: transcription direction=POSITIVE}}
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* LIGAND-RXN:
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{{#set: right end position=5378}}
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** [http://www.genome.jp/dbget-bin/www_bget?R01007 R01007]
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{{#set: centisome position=1.5779455    }}
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* UNIPROT:
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{{#set: reaction associated=PHOSPHAGLYPSYN-RXN}}
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** [http://www.uniprot.org/uniprot/P07286 P07286]
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{{#set: pathway associated=PWY4FS-7|PWY4FS-8|PWY-5269|PWY-7817|PWY-5668|PWY0-1545}}
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** [http://www.uniprot.org/uniprot/P23338 P23338]
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** [http://www.uniprot.org/uniprot/P42864 P42864]
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** [http://www.uniprot.org/uniprot/P39465 P39465]
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** [http://www.uniprot.org/uniprot/Q9UY90 Q9UY90]
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** [http://www.uniprot.org/uniprot/Q58513 Q58513]
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** [http://www.uniprot.org/uniprot/P42867 P42867]
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** [http://www.uniprot.org/uniprot/P42881 P42881]
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** [http://www.uniprot.org/uniprot/P96000 P96000]
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** [http://www.uniprot.org/uniprot/Q9M2M5 Q9M2M5]
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** [http://www.uniprot.org/uniprot/O22211 O22211]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: ec number=EC-2.7.8.15}}
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{{#set: gene associated=CHC_T00006227001_1|CHC_T00007237001_1}}
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{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
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Revision as of 11:24, 18 January 2018

Gene CHC_T00008428001

  • left end position:
    • 4551
  • transcription direction:
    • POSITIVE
  • right end position:
    • 5378
  • centisome position:
    • 1.5779455
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=GCVP-RXN&oldid=7924"