Difference between revisions of "TRPSYN-PWY"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_T00010333001 == * left end position: ** 462 * transcription direction: ** POSITIVE * right end position: ** 1320 * centisome position: ** 9.74889...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO...") |
||
| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRANS-CINNAMATE-4-MONOOXYGENASE-RXN TRANS-CINNAMATE-4-MONOOXYGENASE-RXN] == |
| − | * | + | * direction: |
| − | + | ** LEFT-TO-RIGHT | |
| − | + | * ec number: | |
| − | ** | + | ** [http://enzyme.expasy.org/EC/1.14.13.11 EC-1.14.13.11] |
| − | * | + | |
| − | ** | + | |
| − | + | ||
| − | + | ||
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | ** | + | ** 1 [[NADPH]][c] '''+''' 1 [[CPD-674]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[COUMARATE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[NADP]][c] |
| − | *** | + | * With common name(s): |
| − | == Pathways | + | ** 1 NADPH[c] '''+''' 1 trans-cinnamate[c] '''+''' 1 oxygen[c] '''+''' 1 H+[c] '''=>''' 1 4-coumarate[c] '''+''' 1 H2O[c] '''+''' 1 NADP+[c] |
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * [[CHC_T00009062001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00008616001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00009499001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00010245001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00008663001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00008813001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00010004001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00009131001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | * [[CHC_T00008672001_1]] | ||
| + | ** [[pantograph]]-[[a.taliana]] | ||
| + | == Pathways == | ||
| + | * [[PWY1F-467]], phenylpropanoid biosynthesis, initial reactions: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-467 PWY1F-467] | ||
| + | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
| + | * [[PWY-1121]], suberin monomers biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-1121 PWY-1121] | ||
| + | ** '''7''' reactions found over '''19''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * [[orthology]]: | ||
| + | ** [[pantograph]]: | ||
| + | *** [[a.taliana]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10608 10608] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02253 R02253] |
| − | {{#set: | + | * UNIPROT: |
| + | ** [http://www.uniprot.org/uniprot/Q04468 Q04468] | ||
| + | ** [http://www.uniprot.org/uniprot/P37115 P37115] | ||
| + | ** [http://www.uniprot.org/uniprot/Q9S8R8 Q9S8R8] | ||
| + | ** [http://www.uniprot.org/uniprot/P48522 P48522] | ||
| + | ** [http://www.uniprot.org/uniprot/Q42895 Q42895] | ||
| + | ** [http://www.uniprot.org/uniprot/O81928 O81928] | ||
| + | ** [http://www.uniprot.org/uniprot/O24315 O24315] | ||
| + | ** [http://www.uniprot.org/uniprot/Q43033 Q43033] | ||
| + | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-1.14.13.11}} | ||
| + | {{#set: gene associated=CHC_T00009062001_1|CHC_T00008616001_1|CHC_T00009499001_1|CHC_T00010245001_1|CHC_T00008663001_1|CHC_T00008813001_1|CHC_T00010004001_1|CHC_T00009131001_1|CHC_T00008672001_1}} | ||
| + | {{#set: in pathway=PWY1F-467|PWY-1121}} | ||
| + | {{#set: reconstruction category=orthology}} | ||
| + | {{#set: reconstruction tool=pantograph}} | ||
| + | {{#set: reconstruction source=a.taliana}} | ||
Revision as of 10:48, 18 January 2018
Contents
Reaction TRANS-CINNAMATE-4-MONOOXYGENASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 NADPH[c] + 1 trans-cinnamate[c] + 1 oxygen[c] + 1 H+[c] => 1 4-coumarate[c] + 1 H2O[c] + 1 NADP+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- CHC_T00009062001_1
- CHC_T00008616001_1
- CHC_T00009499001_1
- CHC_T00010245001_1
- CHC_T00008663001_1
- CHC_T00008813001_1
- CHC_T00010004001_1
- CHC_T00009131001_1
- CHC_T00008672001_1
Pathways
- PWY1F-467, phenylpropanoid biosynthesis, initial reactions: PWY1F-467
- 2 reactions found over 2 reactions in the full pathway
- PWY-1121, suberin monomers biosynthesis: PWY-1121
- 7 reactions found over 19 reactions in the full pathway
Reconstruction information
External links
