Difference between revisions of "CHC T00009237001 1"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] == * direction: ** LEFT-TO-RIGHT * common name: ** tryptophan synthase alpha c...")
 
(Created page with "Category:Gene == Gene CHC_T00008808001 == * left end position: ** 165833 * transcription direction: ** NEGATIVE * right end position: ** 166870 * centisome position: ** 48...")
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[[Category:Reaction]]
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[[Category:Gene]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2382 RXN0-2382] ==
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== Gene CHC_T00008808001 ==
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* direction:
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* left end position:
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** LEFT-TO-RIGHT
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** 165833
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* common name:
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* transcription direction:
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** tryptophan synthase alpha chain
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** NEGATIVE
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** Tryptophan synthase subunit beta
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* right end position:
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* ec number:
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** 166870
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** [http://enzyme.expasy.org/EC/4.2.1.122 EC-4.2.1.122]
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* centisome position:
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** 48.39183   
 
* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reactions associated ==
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* With identifiers:
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* [[325-BISPHOSPHATE-NUCLEOTIDASE-RXN]]
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** 1 [[SER]][c] '''+''' 1 [[INDOLE]][c] '''=>''' 1 [[WATER]][c] '''+''' 1 [[TRP]][c]
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** original_genome
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* With common name(s):
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***automated-name-match
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** 1 L-serine[c] '''+''' 1 indole[c] '''=>''' 1 H2O[c] '''+''' 1 L-tryptophan[c]
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== Pathways associated ==
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* [[CHC_T00009102001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[CHC_1120]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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* [[CHC_T00008401001]]
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** ORIGINAL_GENOME
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***AUTOMATED-NAME-MATCH
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== Pathways ==
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* [[TRPSYN-PWY]], L-tryptophan biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=TRPSYN-PWY TRPSYN-PWY]
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** '''6''' reactions found over '''6''' reactions in the full pathway
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== Reconstruction information  ==
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* [[orthology]]:
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** [[pantograph]]:
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*** [[galdieria.sulphuraria]]
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* [[annotation]]:
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** [[pathwaytools]]:
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*** [[original_genome]]
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== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: left end position=165833}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=26434 26434]
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{{#set: transcription direction=NEGATIVE}}
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* LIGAND-RXN:
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{{#set: right end position=166870}}
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** [http://www.genome.jp/dbget-bin/www_bget?R00674 R00674]
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{{#set: centisome position=48.39183    }}
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: reaction associated=325-BISPHOSPHATE-NUCLEOTIDASE-RXN}}
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{{#set: common name=tryptophan synthase alpha chain}}
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{{#set: common name=Tryptophan synthase subunit beta}}
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{{#set: ec number=EC-4.2.1.122}}
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{{#set: gene associated=CHC_T00009102001_1|CHC_1120|CHC_T00008401001}}
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{{#set: in pathway=TRPSYN-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 12:29, 18 January 2018

Gene CHC_T00008808001

  • left end position:
    • 165833
  • transcription direction:
    • NEGATIVE
  • right end position:
    • 166870
  • centisome position:
    • 48.39183
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00009237001_1&oldid=8363"