Difference between revisions of "PRPPAMIDOTRANS-RXN"

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(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PUTRESCINE PUTRESCINE] == * smiles: ** C([N+])CCC[N+] * inchi key: ** InChIKey=KIDHWZJUCRJVML-U...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme...")
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[[Category:Metabolite]]
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[[Category:Reaction]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=PUTRESCINE PUTRESCINE] ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] ==
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* smiles:
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* direction:
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** C([N+])CCC[N+]
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** REVERSIBLE
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* inchi key:
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* ec number:
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** InChIKey=KIDHWZJUCRJVML-UHFFFAOYSA-P
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** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14]
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* common name:
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** putrescine
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* molecular weight:
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** 90.168   
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* Synonym(s):
 
* Synonym(s):
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** diaminobutane
 
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** 1,4-diaminobutane
 
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** 1,4-butanediamine
 
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** tetramethylenediamine
 
  
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== Reaction(s) known to consume the compound ==
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== Reaction Formula ==
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== Reaction(s) known to produce the compound ==
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* With identifiers:
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* [[N-CARBAMOYLPUTRESCINE-AMIDASE-RXN]]
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** 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[GLT]][c] '''+''' 1 [[PPI]][c] '''<=>''' 1 [[PRPP]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[GLN]][c]
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* [[ORNDECARBOX-RXN]]
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* With common name(s):
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== Reaction(s) of unknown directionality ==
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** 1 5-phospho-&beta;-D-ribosylamine[c] '''+''' 1 L-glutamate[c] '''+''' 1 diphosphate[c] '''<=>''' 1 5-phospho-&alpha;-D-ribose 1-diphosphate[c] '''+''' 1 H2O[c] '''+''' 1 L-glutamine[c]
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* [[SPERMIDINESYN-RXN]]
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== Genes associated with this reaction  ==
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Genes have been associated with this reaction based on different elements listed below.
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* Gene: [[CHC_T00009506001_1]]
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** Source: [[orthology-galdieria.sulphuraria]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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** Source: [[orthology-arabidopsis_thaliana]]
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== Pathways  ==
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* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-6122]], 5-aminoimidazole ribonucleotide biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6122 PWY-6122]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282]
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** '''5''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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== Reconstruction information  ==
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* Category: [[orthology]]
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** Source: [[orthology-arabidopsis_thaliana]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-ectocarpus_siliculosus]]
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*** Tool: [[pantograph]]
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** Source: [[orthology-galdieria.sulphuraria]]
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*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
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* CAS : 110-60-1
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* RHEA:
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* METABOLIGHTS : MTBLC326268
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14905 14905]
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* PUBCHEM:
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* LIGAND-RXN:
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** [http://pubchem.ncbi.nlm.nih.gov/summary/summary.cgi?cid=3452892 3452892]
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** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072]
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* HMDB : HMDB01414
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* UNIPROT:
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* LIGAND-CPD:
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** [http://www.uniprot.org/uniprot/P28173 P28173]
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** [http://www.genome.jp/dbget-bin/www_bget?C00134 C00134]
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** [http://www.uniprot.org/uniprot/P35433 P35433]
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* CHEMSPIDER:
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** [http://www.uniprot.org/uniprot/Q06203 Q06203]
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** [http://www.chemspider.com/Chemical-Structure.2695170.html 2695170]
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** [http://www.uniprot.org/uniprot/O29388 O29388]
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* CHEBI:
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** [http://www.uniprot.org/uniprot/O67236 O67236]
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** [http://www.ebi.ac.uk/chebi/searchId.do?chebiId=326268 326268]
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** [http://www.uniprot.org/uniprot/P65829 P65829]
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* BIGG : ptrc
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** [http://www.uniprot.org/uniprot/O57979 O57979]
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{{#set: smiles=C([N+])CCC[N+]}}
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** [http://www.uniprot.org/uniprot/Q9X0X4 Q9X0X4]
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{{#set: inchi key=InChIKey=KIDHWZJUCRJVML-UHFFFAOYSA-P}}
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** [http://www.uniprot.org/uniprot/Q9RXT6 Q9RXT6]
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{{#set: common name=putrescine}}
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** [http://www.uniprot.org/uniprot/Q9K0C4 Q9K0C4]
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{{#set: molecular weight=90.168    }}
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** [http://www.uniprot.org/uniprot/Q9V253 Q9V253]
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{{#set: common name=diaminobutane|1,4-diaminobutane|1,4-butanediamine|tetramethylenediamine}}
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** [http://www.uniprot.org/uniprot/Q9PIT3 Q9PIT3]
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{{#set: produced by=N-CARBAMOYLPUTRESCINE-AMIDASE-RXN|ORNDECARBOX-RXN}}
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** [http://www.uniprot.org/uniprot/Q57657 Q57657]
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{{#set: consumed or produced by=SPERMIDINESYN-RXN}}
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** [http://www.uniprot.org/uniprot/Q9JVC9 Q9JVC9]
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** [http://www.uniprot.org/uniprot/O26742 O26742]
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** [http://www.uniprot.org/uniprot/P43854 P43854]
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** [http://www.uniprot.org/uniprot/P35853 P35853]
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** [http://www.uniprot.org/uniprot/P41390 P41390]
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** [http://www.uniprot.org/uniprot/Q27601 Q27601]
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** [http://www.uniprot.org/uniprot/Q38999 Q38999]
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** [http://www.uniprot.org/uniprot/P04046 P04046]
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** [http://www.uniprot.org/uniprot/Q55621 Q55621]
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** [http://www.uniprot.org/uniprot/Q55038 Q55038]
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** [http://www.uniprot.org/uniprot/Q9STG9 Q9STG9]
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** [http://www.uniprot.org/uniprot/Q9T0J5 Q9T0J5]
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** [http://www.uniprot.org/uniprot/P52418 P52418]
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** [http://www.uniprot.org/uniprot/P52419 P52419]
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** [http://www.uniprot.org/uniprot/Q22134 Q22134]
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** [http://www.uniprot.org/uniprot/Q9ZB05 Q9ZB05]
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** [http://www.uniprot.org/uniprot/P00497 P00497]
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** [http://www.uniprot.org/uniprot/P0AG16 P0AG16]
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{{#set: direction=REVERSIBLE}}
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{{#set: ec number=EC-2.4.2.14}}
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{{#set: gene associated=CHC_T00009506001_1}}
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{{#set: in pathway=PWY-6121|PWY-6122|PWY-7282|PWY-6277}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
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{{#set: reconstruction tool=pantograph}}

Revision as of 15:51, 23 May 2018

Reaction PRPPAMIDOTRANS-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 5-phospho-β-D-ribosylamine[c] + 1 L-glutamate[c] + 1 diphosphate[c] <=> 1 5-phospho-α-D-ribose 1-diphosphate[c] + 1 H2O[c] + 1 L-glutamine[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
    • 5 reactions found over 9 reactions in the full pathway
  • PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
    • 7 reactions found over 9 reactions in the full pathway

Reconstruction information

External links




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