Difference between revisions of "PWY-5101"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERDECARB-RXN PHOSPHASERDECARB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** Phosp...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=PHOSPHASERDECARB-RXN PHOSPHASERDECARB-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5101 PWY-5101] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183924 TAX-183924]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-224756 TAX-224756]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183925 TAX-183925]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-203691 TAX-203691]
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183939 TAX-183939]
 
* common name:
 
* common name:
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** Phosphatidylserine decarboxylase
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** L-isoleucine biosynthesis II
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* ec number:
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** [http://enzyme.expasy.org/EC/4.1.1.65 EC-4.1.1.65]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''8''' reactions in the full pathway
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** 1 [[L-1-PHOSPHATIDYL-SERINE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-ETHANOLAMINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c]
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* [[ACETOOHBUTSYN-RXN]]
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* With common name(s):
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** 3 associated gene(s):
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** 1 a 3-O-sn-phosphatidyl-L-serine[c] '''+''' 1 H+[c] '''=>''' 1 an L-1-phosphatidylethanolamine[c] '''+''' 1 CO2[c]
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*** [[CHC_980]]
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*** [[CHC_T00002409001_1]]
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== Genes associated with this reaction  ==
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*** [[CHC_T00008160001_1]]
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Genes have been associated with this reaction based on different elements listed below.
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** 2 reconstruction source(s) associated:
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* [[CHC_T00008892001]]
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*** [[annotation-original_genome]]
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** ORIGINAL_GENOME
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*** [[orthology-galdieria.sulphuraria]]
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***AUTOMATED-NAME-MATCH
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* [[BRANCHED-CHAINAMINOTRANSFERILEU-RXN]]
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* [[CHC_T00008892001_1]]
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** 1 associated gene(s):
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[CHC_T00003864001_1]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[PWY-5669]], phosphatidylethanolamine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5669 PWY-5669]
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*** [[orthology-arabidopsis_thaliana]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[orthology]]:
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* [[DIHYDROXYMETVALDEHYDRAT-RXN]]
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** [[pantograph]]:
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** 1 associated gene(s):
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00009385001_1]]
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* [[annotation]]:
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** 3 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[original_genome]]
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[orthology-galdieria.sulphuraria]]
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* [[RXN-7745]]
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** 3 associated gene(s):
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*** [[CHC_T00009162001_1]]
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*** [[CHC_T00009293001_1]]
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*** [[CHC_T00008852001_1]]
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** 2 reconstruction source(s) associated:
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=R-2-METHYLMALATE-DEHYDRATASE-RXN R-2-METHYLMALATE-DEHYDRATASE-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-16062 RXN-16062]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7743 RXN-7743]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-7744 RXN-7744]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-183924}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=20828 20828]
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{{#set: taxonomic range=TAX-224756}}
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* LIGAND-RXN:
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{{#set: taxonomic range=TAX-183925}}
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** [http://www.genome.jp/dbget-bin/www_bget?R02055 R02055]
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{{#set: taxonomic range=TAX-203691}}
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* UNIPROT:
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{{#set: taxonomic range=TAX-183939}}
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** [http://www.uniprot.org/uniprot/P0A8K1 P0A8K1]
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{{#set: common name=L-isoleucine biosynthesis II}}
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** [http://www.uniprot.org/uniprot/P39006 P39006]
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{{#set: reaction found=4}}
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** [http://www.uniprot.org/uniprot/P39822 P39822]
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{{#set: total reaction=8}}
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** [http://www.uniprot.org/uniprot/Q9ZJN0 Q9ZJN0]
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/O23513 O23513]
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** [http://www.uniprot.org/uniprot/Q9PLM7 Q9PLM7]
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** [http://www.uniprot.org/uniprot/O25911 O25911]
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** [http://www.uniprot.org/uniprot/O84705 O84705]
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** [http://www.uniprot.org/uniprot/Q9Z767 Q9Z767]
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** [http://www.uniprot.org/uniprot/Q9PP76 Q9PP76]
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** [http://www.uniprot.org/uniprot/P43789 P43789]
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** [http://www.uniprot.org/uniprot/Q46192 Q46192]
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** [http://www.uniprot.org/uniprot/P53037 P53037]
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** [http://www.uniprot.org/uniprot/P27465 P27465]
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** [http://www.uniprot.org/uniprot/Q9SZH1 Q9SZH1]
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** [http://www.uniprot.org/uniprot/O14333 O14333]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=Phosphatidylserine decarboxylase}}
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{{#set: ec number=EC-4.1.1.65}}
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{{#set: gene associated=CHC_T00008892001|CHC_T00008892001_1}}
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{{#set: in pathway=PWY-5669}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 14:51, 23 May 2018

Pathway PWY-5101

Reaction(s) found

4 reactions found over 8 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-5101&oldid=12346"