Difference between revisions of "PWY-7357"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * common na...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-47...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=HISTIDINE--TRNA-LIGASE-RXN HISTIDINE--TRNA-LIGASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-7357 PWY-7357] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
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** histidine tRNA synthetase
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** thiamine formation from pyrithiamine and oxythiamine (yeast)
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* ec number:
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** [http://enzyme.expasy.org/EC/6.1.1.21 EC-6.1.1.21]
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* Synonym(s):
 
* Synonym(s):
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
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** 1 [[ATP]][c] '''+''' 1 [[HIS-tRNAs]][c] '''+''' 1 [[HIS]][c] '''=>''' 1 [[Charged-HIS-tRNAs]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PPI]][c]
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* [[PYRIMSYN3-RXN]]
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* With common name(s):
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** 1 associated gene(s):
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** 1 ATP[c] '''+''' 1 a tRNAhis[c] '''+''' 1 L-histidine[c] '''=>''' 1 an L-histidyl-[tRNAhis][c] '''+''' 1 AMP[c] '''+''' 1 diphosphate[c]
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*** [[CHC_T00006163001_1]]
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** 3 reconstruction source(s) associated:
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== Genes associated with this reaction  ==
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*** [[orthology-arabidopsis_thaliana]]
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Genes have been associated with this reaction based on different elements listed below.
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*** [[orthology-ectocarpus_siliculosus]]
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* [[CHC_T00004806001_1]]
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*** [[orthology-galdieria.sulphuraria]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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* [[THI-P-SYN-RXN]]
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* [[CHC_255]]
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** 2 associated gene(s):
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** ORIGINAL_GENOME
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*** [[CHC_T00006435001_1]]
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***AUTOMATED-NAME-MATCH
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*** [[CHC_T00006163001_1]]
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== Pathways  ==
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** 3 reconstruction source(s) associated:
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* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
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*** [[orthology-arabidopsis_thaliana]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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*** [[orthology-ectocarpus_siliculosus]]
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== Reconstruction information  ==
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*** [[orthology-galdieria.sulphuraria]]
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* [[orthology]]:
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* [[THIAZOLSYN3-RXN]]
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** [[pantograph]]:
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** 1 associated gene(s):
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*** [[galdieria.sulphuraria]]
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*** [[CHC_T00007093001_1]]
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* [[annotation]]:
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** 2 reconstruction source(s) associated:
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** [[pathwaytools]]:
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*** [[orthology-ectocarpus_siliculosus]]
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*** [[original_genome]]
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*** [[orthology-galdieria.sulphuraria]]
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== Reaction(s) not found ==
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* [http://metacyc.org/META/NEW-IMAGE?object=OHMETPYRKIN-RXN OHMETPYRKIN-RXN]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14857 RXN-14857]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN-14858 RXN-14858]
 
== External links  ==
 
== External links  ==
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* RHEA:
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{{#set: taxonomic range=TAX-4751}}
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** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17313 17313]
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{{#set: common name=thiamine formation from pyrithiamine and oxythiamine (yeast)}}
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* LIGAND-RXN:
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{{#set: reaction found=3}}
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** [http://www.genome.jp/dbget-bin/www_bget?R03655 R03655]
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{{#set: total reaction=6}}
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* UNIPROT:
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{{#set: completion rate=50.0}}
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** [http://www.uniprot.org/uniprot/Q9X0H5 Q9X0H5]
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** [http://www.uniprot.org/uniprot/O58028 O58028]
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** [http://www.uniprot.org/uniprot/O67223 O67223]
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** [http://www.uniprot.org/uniprot/Q9ZK27 Q9ZK27]
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** [http://www.uniprot.org/uniprot/Q9PPF4 Q9PPF4]
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** [http://www.uniprot.org/uniprot/P56455 P56455]
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** [http://www.uniprot.org/uniprot/Q58406 Q58406]
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** [http://www.uniprot.org/uniprot/O32039 O32039]
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** [http://www.uniprot.org/uniprot/O51160 O51160]
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** [http://www.uniprot.org/uniprot/O66522 O66522]
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** [http://www.uniprot.org/uniprot/Q9ZDL9 Q9ZDL9]
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** [http://www.uniprot.org/uniprot/Q9JUZ9 Q9JUZ9]
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** [http://www.uniprot.org/uniprot/Q9CE78 Q9CE78]
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** [http://www.uniprot.org/uniprot/P47281 P47281]
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** [http://www.uniprot.org/uniprot/O34459 O34459]
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** [http://www.uniprot.org/uniprot/O83647 O83647]
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** [http://www.uniprot.org/uniprot/O84547 O84547]
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** [http://www.uniprot.org/uniprot/Q9Z7P1 Q9Z7P1]
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** [http://www.uniprot.org/uniprot/P43823 P43823]
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** [http://www.uniprot.org/uniprot/Q61035 Q61035]
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** [http://www.uniprot.org/uniprot/P30053 P30053]
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** [http://www.uniprot.org/uniprot/P46696 P46696]
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** [http://www.uniprot.org/uniprot/P51348 P51348]
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** [http://www.uniprot.org/uniprot/P75069 P75069]
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** [http://www.uniprot.org/uniprot/Q55653 Q55653]
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** [http://www.uniprot.org/uniprot/Q49027 Q49027]
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** [http://www.uniprot.org/uniprot/P07263 P07263]
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** [http://www.uniprot.org/uniprot/P60906 P60906]
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** [http://www.uniprot.org/uniprot/P12081 P12081]
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** [http://www.uniprot.org/uniprot/P93422 P93422]
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** [http://www.uniprot.org/uniprot/O82413 O82413]
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{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: common name=histidine tRNA synthetase}}
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{{#set: ec number=EC-6.1.1.21}}
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{{#set: gene associated=CHC_T00004806001_1|CHC_255}}
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{{#set: in pathway=TRNA-CHARGING-PWY}}
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{{#set: reconstruction category=orthology}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 14:56, 23 May 2018

Pathway PWY-7357

  • taxonomic range:
  • common name:
    • thiamine formation from pyrithiamine and oxythiamine (yeast)
  • Synonym(s):

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=PWY-7357&oldid=12657"