Difference between revisions of "RXN-16042"

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(Created page with "Category:Gene == Gene CHC_T00008575001 == * left end position: ** 166944 * transcription direction: ** NEGATIVE * right end position: ** 168494 * centisome position: ** 37...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Gene]]
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[[Category:Reaction]]
== Gene CHC_T00008575001 ==
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-16042 RXN-16042] ==
* left end position:
+
* direction:
** 166944
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** LEFT-TO-RIGHT
* transcription direction:
+
* ec number:
** NEGATIVE
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** [http://enzyme.expasy.org/EC/2.3.1.23 EC-2.3.1.23]
* right end position:
+
** 168494
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* centisome position:
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** 37.817192   
+
 
* Synonym(s):
 
* Synonym(s):
  
== Reactions associated ==
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== Reaction Formula ==
* [[SUCCSEMIALDDEHYDROG-RXN]]
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* With identifiers:
** original_genome
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** 1 [[Glycerolipids]][c] '''+''' 1 [[CPD-14394]][c] '''=>''' 1 [[CO-A]][c] '''+''' 1 [[CPD-17281]][c]
***automated-name-match
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* With common name(s):
== Pathways associated ==
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** 1 a glycerolipid[c] '''+''' 1 (8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyl-CoA[c] '''=>''' 1 coenzyme A[c] '''+''' 1 a [glycerolipid]-icosatetraenoate[c]
* [[PWY-6537]]
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* [[3-HYDROXYPHENYLACETATE-DEGRADATION-PWY]]
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== Genes associated with this reaction  ==
* [[PWY-6993]]
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Genes have been associated with this reaction based on different elements listed below.
* [[P105-PWY]]
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* Gene: [[CHC_T00007447001_1]]
* [[P181-PWY]]
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** Source: [[orthology-ectocarpus_siliculosus]]
 +
== Pathways  ==
 +
* [[PWY-6958]], icosapentaenoate biosynthesis I (lower eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6958 PWY-6958]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
== Reconstruction information  ==
 +
* Category: [[orthology]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
{{#set: left end position=166944}}
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{{#set: direction=LEFT-TO-RIGHT}}
{{#set: transcription direction=NEGATIVE}}
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{{#set: ec number=EC-2.3.1.23}}
{{#set: right end position=168494}}
+
{{#set: gene associated=CHC_T00007447001_1}}
{{#set: centisome position=37.817192    }}
+
{{#set: in pathway=PWY-6958}}
{{#set: reaction associated=SUCCSEMIALDDEHYDROG-RXN}}
+
{{#set: reconstruction category=orthology}}
{{#set: pathway associated=PWY-6537|3-HYDROXYPHENYLACETATE-DEGRADATION-PWY|PWY-6993|P105-PWY|P181-PWY}}
+
{{#set: reconstruction source=orthology-ectocarpus_siliculosus}}
 +
{{#set: reconstruction tool=pantograph}}

Latest revision as of 14:58, 23 May 2018

Reaction RXN-16042

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 a glycerolipid[c] + 1 (8Z,11Z,14Z,17Z)-icosa-8,11,14,17-tetraenoyl-CoA[c] => 1 coenzyme A[c] + 1 a [glycerolipid]-icosatetraenoate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6958, icosapentaenoate biosynthesis I (lower eukaryotes): PWY-6958
    • 2 reactions found over 8 reactions in the full pathway

Reconstruction information

External links