Difference between revisions of "RXN-12400"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] == * direction: ** REVERSIBLE * ec number: ** [http://enzyme.expasy.org/EC/2.5.1...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] == * direction: ** LEFT-TO-RIGHT * common name: ** xyloglucan XLLG oligosaccha...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN1F-66 RXN1F-66] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12400 RXN-12400] ==
 
* direction:
 
* direction:
−
** REVERSIBLE
+
** LEFT-TO-RIGHT
 +
* common name:
 +
** xyloglucan XLLG oligosaccharide β-galactosidase
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/2.5.1.62 EC-2.5.1.62]
+
** [http://enzyme.expasy.org/EC/3.2.1.23 EC-3.2.1.23]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[CHLOROPHYLLIDE-A]][c] '''+''' 1 [[PHYTYL-PYROPHOSPHATE]][c] '''<=>''' 1 [[CHLOROPHYLL-A]][c] '''+''' 1 [[PPI]][c]
+
** 2 [[WATER]][c] '''+''' 1 [[CPD-13378]][c] '''=>''' 1 [[CPD-13375]][c] '''+''' 2 [[D-galactopyranose]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 chlorophyllide a[c] '''+''' 1 phytyl diphosphate[c] '''<=>''' 1 chlorophyll a[c] '''+''' 1 diphosphate[c]
+
** 2 H2O[c] '''+''' 1 XLLG xyloglucan oligosaccharide[c] '''=>''' 1 XXXG xyloglucan oligosaccharide[c] '''+''' 2 D-galactopyranose[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008377001_1]]
+
* Gene: [[CHC_T00008905001_1]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00008606001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5068]], chlorophyll cycle: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5068 PWY-5068]
+
* [[PWY-6807]], xyloglucan degradation II (exoglucanase): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6807 PWY-6807]
−
** '''2''' reactions found over '''6''' reactions in the full pathway
+
** '''3''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7764]], chlorophyll a biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7764 PWY-7764]
+
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
−
* [[PWY-5086]], chlorophyll a biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5086 PWY-5086]
+
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
−
* RHEA:
+
{{#set: direction=LEFT-TO-RIGHT}}
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17317 17317]
+
{{#set: common name=xyloglucan XLLG oligosaccharide &beta;-galactosidase}}
−
* LIGAND-RXN:
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{{#set: ec number=EC-3.2.1.23}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06284 R06284]
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{{#set: gene associated=CHC_T00008905001_1|CHC_T00008606001_1}}
−
{{#set: direction=REVERSIBLE}}
+
{{#set: in pathway=PWY-6807}}
−
{{#set: ec number=EC-2.5.1.62}}
+
−
{{#set: gene associated=CHC_T00008377001_1}}
+
−
{{#set: in pathway=PWY-5068|PWY-7764|PWY-5086}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 

Latest revision as of 15:58, 23 May 2018

Reaction RXN-12400

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • xyloglucan XLLG oligosaccharide β-galactosidase
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 2 H2O[c] + 1 XLLG xyloglucan oligosaccharide[c] => 1 XXXG xyloglucan oligosaccharide[c] + 2 D-galactopyranose[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6807, xyloglucan degradation II (exoglucanase): PWY-6807
    • 3 reactions found over 6 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12400&oldid=12774"