Difference between revisions of "CHC T00008854001"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] == * direction: ** LEFT-TO-RIGHT * common name: ** NADPH:protochlorophyllide oxi...")
(Created page with "Category:Gene == Gene CHC_T00008854001 == * left end position: ** 28162 * transcription direction: ** POSITIVE * right end position: ** 28812 * centisome position: ** 11.1...")
 
Line 1: Line 1:
−
[[Category:Reaction]]
+
[[Category:Gene]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] ==
+
== Gene CHC_T00008854001 ==
−
* direction:
+
* left end position:
−
** LEFT-TO-RIGHT
+
** 28162
−
* common name:
+
* transcription direction:
−
** NADPH:protochlorophyllide oxidoreductase
+
** POSITIVE
−
* ec number:
+
* right end position:
−
** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33]
+
** 28812
 +
* centisome position:
 +
** 11.154107   
 
* Synonym(s):
 
* Synonym(s):
  
−
== Reaction Formula ==
+
== Reactions associated ==
−
* With identifiers:
+
* Reaction: [[2.7.8.24-RXN]]
−
** 1 [[PROTON]][c] '''+''' 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c]
+
** Source: [[annotation-original_genome]]
−
* With common name(s):
+
*** Assignment: automated-name-match
−
** 1 H+[c] '''+''' 1 3,8-divinyl protochlorophyllide a[c] '''+''' 1 NADPH[c] '''=>''' 1 NADP+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c]
+
== Pathways associated ==
−
 
+
* [[PWY-6826]]
−
== Genes associated with this reaction  ==
+
−
Genes have been associated with this reaction based on different elements listed below.
+
−
* [[CHC_T00010090001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009425001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
== Pathways ==
+
−
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN]
+
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
−
== Reconstruction information  ==
+
−
* [[orthology]]:
+
−
** [[pantograph]]:
+
−
*** [[galdieria.sulphuraria]]
+
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* LIGAND-RXN:
+
{{#set: left end position=28162}}
−
** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286]
+
{{#set: transcription direction=POSITIVE}}
−
{{#set: direction=LEFT-TO-RIGHT}}
+
{{#set: right end position=28812}}
−
{{#set: common name=NADPH:protochlorophyllide oxidoreductase}}
+
{{#set: centisome position=11.154107    }}
−
{{#set: ec number=EC-1.3.1.33}}
+
{{#set: reaction associated=2.7.8.24-RXN}}
−
{{#set: gene associated=CHC_T00010090001_1|CHC_T00009425001}}
+
{{#set: pathway associated=PWY-6826}}
−
{{#set: in pathway=CHLOROPHYLL-SYN}}
+
−
{{#set: reconstruction category=orthology}}
+
−
{{#set: reconstruction tool=pantograph}}
+
−
{{#set: reconstruction source=galdieria.sulphuraria}}
+
−
{{#set: reconstruction category=annotation}}
+
−
{{#set: reconstruction tool=pathwaytools}}
+
−
{{#set: reconstruction source=original_genome}}
+

Latest revision as of 14:59, 23 May 2018

Gene CHC_T00008854001

  • left end position:
    • 28162
  • transcription direction:
    • POSITIVE
  • right end position:
    • 28812
  • centisome position:
    • 11.154107
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=CHC_T00008854001&oldid=12807"