Difference between revisions of "RXN-17127"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE--TRNA-LIGASE-RXN GLYCINE--TRNA-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: **...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLYCINE--TRNA-LIGASE-RXN GLYCINE--TRNA-LIGASE-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17127 RXN-17127] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.1.1.14 EC-6.1.1.14]
+
** [http://enzyme.expasy.org/EC/6.3.1.20 EC-6.3.1.20]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[GLY]][c] '''+''' 1 [[GLY-tRNAs]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[Charged-GLY-tRNAs]][c]
+
** 1 [[Lipoyl-Protein-L-Lysine]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[LIPOIC-ACID]][c] '''=>''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 1 [[PPI]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 glycine[c] '''+''' 1 a tRNAgly[c] '''+''' 1 ATP[c] '''=>''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 a glycyl-[tRNAgly][c]
+
** 1 a [lipoyl-carrier protein]-L-lysine[c] '''+''' 1 ATP[c] '''+''' 1 (R)-lipoate[c] '''=>''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 1 diphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00007645001_1]]
+
* Gene: [[CHC_T00006203001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00004794001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[TRNA-CHARGING-PWY]], tRNA charging: [http://metacyc.org/META/NEW-IMAGE?object=TRNA-CHARGING-PWY TRNA-CHARGING-PWY]
 
−
** '''21''' reactions found over '''21''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* RHEA:
 
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16013 16013]
 
−
* LIGAND-RXN:
 
−
** [http://www.genome.jp/dbget-bin/www_bget?R03654 R03654]
 
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P41250 P41250]
 
−
** [http://www.uniprot.org/uniprot/P54380 P54380]
 
−
** [http://www.uniprot.org/uniprot/Q9ZCB1 Q9ZCB1]
 
−
** [http://www.uniprot.org/uniprot/P43822 P43822]
 
−
** [http://www.uniprot.org/uniprot/P54381 P54381]
 
−
** [http://www.uniprot.org/uniprot/O51344 O51344]
 
−
** [http://www.uniprot.org/uniprot/Q46371 Q46371]
 
−
** [http://www.uniprot.org/uniprot/Q9ZCB0 Q9ZCB0]
 
−
** [http://www.uniprot.org/uniprot/Q9WY59 Q9WY59]
 
−
** [http://www.uniprot.org/uniprot/P43821 P43821]
 
−
** [http://www.uniprot.org/uniprot/O83678 O83678]
 
−
** [http://www.uniprot.org/uniprot/Q9WY60 Q9WY60]
 
−
** [http://www.uniprot.org/uniprot/Q9PPK3 Q9PPK3]
 
−
** [http://www.uniprot.org/uniprot/P56454 P56454]
 
−
** [http://www.uniprot.org/uniprot/Q9PN63 Q9PN63]
 
−
** [http://www.uniprot.org/uniprot/Q57681 Q57681]
 
−
** [http://www.uniprot.org/uniprot/P67029 P67029]
 
−
** [http://www.uniprot.org/uniprot/O67081 O67081]
 
−
** [http://www.uniprot.org/uniprot/O67898 O67898]
 
−
** [http://www.uniprot.org/uniprot/O59235 O59235]
 
−
** [http://www.uniprot.org/uniprot/P47493 P47493]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKP1 Q9ZKP1]
 
−
** [http://www.uniprot.org/uniprot/Q9JW67 Q9JW67]
 
−
** [http://www.uniprot.org/uniprot/P56453 P56453]
 
−
** [http://www.uniprot.org/uniprot/O27874 O27874]
 
−
** [http://www.uniprot.org/uniprot/Q9ZKM9 Q9ZKM9]
 
−
** [http://www.uniprot.org/uniprot/Q9CGK0 Q9CGK0]
 
−
** [http://www.uniprot.org/uniprot/P38088 P38088]
 
−
** [http://www.uniprot.org/uniprot/Q06817 Q06817]
 
−
** [http://www.uniprot.org/uniprot/Q51114 Q51114]
 
−
** [http://www.uniprot.org/uniprot/P75425 P75425]
 
−
** [http://www.uniprot.org/uniprot/Q55716 Q55716]
 
−
** [http://www.uniprot.org/uniprot/P00960 P00960]
 
−
** [http://www.uniprot.org/uniprot/P00961 P00961]
 
−
** [http://www.uniprot.org/uniprot/Q8L785 Q8L785]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-6.1.1.14}}
+
{{#set: ec number=EC-6.3.1.20}}
−
{{#set: gene associated=CHC_T00007645001_1|CHC_T00004794001_1}}
+
{{#set: gene associated=CHC_T00006203001_1}}
−
{{#set: in pathway=TRNA-CHARGING-PWY}}
+
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 14:59, 23 May 2018

Reaction RXN-17127

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-17127&oldid=12815"