Difference between revisions of "RXN-12567"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=THREDEHYD-RXN THREDEHYD-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/4.3.1.19 EC-4.3.1.19]
+
** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[THR]][c] '''=>''' 1 [[AMMONIUM]][c] '''+''' 1 [[2-OXOBUTANOATE]][c]
+
** 1 [[OH-HEXANOYL-COA]][c] '''=>''' 1 [[CPD0-2121]][c] '''+''' 1 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 L-threonine[c] '''=>''' 1 ammonium[c] '''+''' 1 2-oxobutanoate[c]
+
** 1 (S)-3-hydroxyhexanoyl-CoA[c] '''=>''' 1 trans-hex-2-enoyl-CoA[c] '''+''' 1 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00007475001_1]]
+
* Gene: [[CHC_T00009349001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
** [[pantograph]]-[[a.taliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
* [[CHC_T00005128001_1]]
+
* Gene: [[CHC_T00009422001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
* Gene: [[CHC_T00009190001_1]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[CHC_T00009110001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY66-428]], L-threonine degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY66-428 PWY66-428]
+
* [[PWY-6863]], pyruvate fermentation to hexanol (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6863 PWY-6863]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''10''' reactions found over '''11''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
*** [[a.taliana]]
+
** Source: [[orthology-galdieria.sulphuraria]]
 +
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22108 22108]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=30549 30549]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
−
** [http://www.genome.jp/dbget-bin/www_bget?R00996 R00996]
+
** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749]
−
* UNIPROT:
+
−
** [http://www.uniprot.org/uniprot/P25306 P25306]
+
−
** [http://www.uniprot.org/uniprot/Q04513 Q04513]
+
−
** [http://www.uniprot.org/uniprot/P37946 P37946]
+
−
** [http://www.uniprot.org/uniprot/Q9JZW1 Q9JZW1]
+
−
** [http://www.uniprot.org/uniprot/Q02145 Q02145]
+
−
** [http://www.uniprot.org/uniprot/P66897 P66897]
+
−
** [http://www.uniprot.org/uniprot/Q9WYJ1 Q9WYJ1]
+
−
** [http://www.uniprot.org/uniprot/Q9PP95 Q9PP95]
+
−
** [http://www.uniprot.org/uniprot/P25379 P25379]
+
−
** [http://www.uniprot.org/uniprot/P00927 P00927]
+
−
** [http://www.uniprot.org/uniprot/P20506 P20506]
+
−
** [http://www.uniprot.org/uniprot/P0AGF6 P0AGF6]
+
−
** [http://www.uniprot.org/uniprot/P04968 P04968]
+
−
** [http://www.uniprot.org/uniprot/P20132 P20132]
+
−
** [http://www.uniprot.org/uniprot/P09367 P09367]
+
−
** [http://www.uniprot.org/uniprot/Q9RWU8 Q9RWU8]
+
−
** [http://www.uniprot.org/uniprot/Q9JUX5 Q9JUX5]
+
−
** [http://www.uniprot.org/uniprot/Q9ZD93 Q9ZD93]
+
−
** [http://www.uniprot.org/uniprot/P31212 P31212]
+
−
** [http://www.uniprot.org/uniprot/P36007 P36007]
+
−
** [http://www.uniprot.org/uniprot/P73375 P73375]
+
−
** [http://www.uniprot.org/uniprot/Q9T0D1 Q9T0D1]
+
−
** [http://www.uniprot.org/uniprot/Q39469 Q39469]
+
−
** [http://www.uniprot.org/uniprot/Q93968 Q93968]
+
−
** [http://www.uniprot.org/uniprot/Q9XAA4 Q9XAA4]
+
−
** [http://www.uniprot.org/uniprot/O94634 O94634]
+
−
** [http://www.uniprot.org/uniprot/O59791 O59791]
+
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: ec number=EC-4.3.1.19}}
+
{{#set: ec number=EC-4.2.1.17}}
−
{{#set: gene associated=CHC_T00007475001_1|CHC_T00005128001_1}}
+
{{#set: gene associated=CHC_T00009349001_1|CHC_T00009422001_1|CHC_T00009190001_1|CHC_T00009110001_1}}
−
{{#set: in pathway=PWY66-428}}
+
{{#set: in pathway=PWY-6863}}
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria|a.taliana}}
 

Revision as of 15:01, 23 May 2018

Reaction RXN-12567

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxyhexanoyl-CoA[c] => 1 trans-hex-2-enoyl-CoA[c] + 1 H2O[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
    • 10 reactions found over 11 reactions in the full pathway

Reconstruction information

External links




Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12567&oldid=12931"