Difference between revisions of "RXN-3701"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7033 CPD-7033] == * smiles: ** CCC(CO)C * inchi key: ** InChIKey=QPRQEDXDYOZYLA-UHFFFAOYSA-...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == * direction: ** REVERSIBLE * common name: ** Rab geranylgeranyltransferase, b...") |
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| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-3701 RXN-3701] == |
| − | * | + | * direction: |
| − | ** | + | ** REVERSIBLE |
| − | + | ||
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** Rab geranylgeranyltransferase, beta subunit |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.5.1.60 EC-2.5.1.60] |
| + | ** [http://enzyme.expasy.org/EC/2.5.1.59 EC-2.5.1.59] | ||
* Synonym(s): | * Synonym(s): | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | == Reaction | + | == Reaction Formula == |
| − | = | + | * With identifiers: |
| − | * [[ | + | ** 1 [[GERANYLGERANYL-PP]][c] '''+''' 1 [[PROT-CYS]][c] '''<=>''' 1 [[PPI]][c] '''+''' 1 [[S-GERANYLGERANYL-PROTEIN]][c] |
| − | == | + | * With common name(s): |
| + | ** 1 geranylgeranyl diphosphate[c] '''+''' 1 a [protein]-L-cysteine[c] '''<=>''' 1 diphosphate[c] '''+''' 1 a [protein]-S-geranylgeranyl-L-cysteine[c] | ||
| + | |||
| + | == Genes associated with this reaction == | ||
| + | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[CHC_T00009072001]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Assignment: AUTOMATED-NAME-MATCH | ||
| + | * Gene: [[CHC_T00009072001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[CHC_T00006421001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | * Gene: [[CHC_T00003446001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | == Pathways == | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | + | {{#set: direction=REVERSIBLE}} | |
| − | + | {{#set: common name=Rab geranylgeranyltransferase, beta subunit}} | |
| − | + | {{#set: ec number=EC-2.5.1.60}} | |
| − | + | {{#set: ec number=EC-2.5.1.59}} | |
| − | + | {{#set: gene associated=CHC_T00009072001|CHC_T00009072001_1|CHC_T00006421001_1|CHC_T00003446001_1}} | |
| − | + | {{#set: in pathway=}} | |
| − | + | {{#set: reconstruction category=orthology|annotation}} | |
| − | {{#set: | + | {{#set: reconstruction source=annotation-original_genome|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} |
| − | {{#set: | + | {{#set: reconstruction tool=pantograph|pathwaytools}} |
| − | {{#set: | + | |
| − | {{#set: | + | |
| − | {{#set: | + | |
| − | {{#set: | + | |
Revision as of 16:02, 23 May 2018
Contents
Reaction RXN-3701
- direction:
- REVERSIBLE
- common name:
- Rab geranylgeranyltransferase, beta subunit
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 GERANYLGERANYL-PP[c] + 1 PROT-CYS[c] <=> 1 PPI[c] + 1 S-GERANYLGERANYL-PROTEIN[c]
- With common name(s):
- 1 geranylgeranyl diphosphate[c] + 1 a [protein]-L-cysteine[c] <=> 1 diphosphate[c] + 1 a [protein]-S-geranylgeranyl-L-cysteine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009072001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00009072001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
- Gene: CHC_T00006421001_1
- Source: orthology-galdieria.sulphuraria
- Gene: CHC_T00003446001_1
- Source: orthology-galdieria.sulphuraria
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
