Difference between revisions of "PWY3O-355"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLOPHANATE-HYDROLASE-RXN ALLOPHANATE-HYDROLASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-...")
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[[Category:Reaction]]
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[[Category:Pathway]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ALLOPHANATE-HYDROLASE-RXN ALLOPHANATE-HYDROLASE-RXN] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-355 PWY3O-355] ==
* direction:
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* taxonomic range:
** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-4751 TAX-4751]
 
* common name:
 
* common name:
** allophanate hydrolase
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** stearate biosynthesis III (fungi)
* ec number:
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** [http://enzyme.expasy.org/EC/3.5.1.54 EC-3.5.1.54]
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* Synonym(s):
 
* Synonym(s):
 +
** fatty acid biosynthesis
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** stearic acid biosynthesis
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** octadecanoate biosynthesis
 +
** saturated fatty acid biosynthesis
  
== Reaction Formula ==
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== Reaction(s) found ==
* With identifiers:
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'''3''' reactions found over '''6''' reactions in the full pathway
** 1 [[CPD-578]][c] '''+''' 1 [[WATER]][c] '''+''' 3 [[PROTON]][c] '''=>''' 2 [[CARBON-DIOXIDE]][c] '''+''' 2 [[AMMONIUM]][c]
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* [[RXN-9633]]
* With common name(s):
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** 4 associated gene(s):
** 1 urea-1-carboxylate[c] '''+''' 1 H2O[c] '''+''' 3 H+[c] '''=>''' 2 CO2[c] '''+''' 2 ammonium[c]
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*** [[CHC_T00008477001]]
 
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*** [[CHC_T00008517001_1]]
== Genes associated with this reaction  ==
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*** [[CHC_T00008496001]]
Genes have been associated with this reaction based on different elements listed below.
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*** [[CHC_T00008557001]]
* [[CHC_T00009441001]]
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** 3 reconstruction source(s) associated:
** ORIGINAL_GENOME
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*** [[annotation-original_genome]]
***AUTOMATED-NAME-MATCH
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*** [[orthology-ectocarpus_siliculosus]]
== Pathways  ==
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*** [[orthology-galdieria.sulphuraria]]
* [[PWY-5169]], cyanurate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5169 PWY-5169]
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* [[RXN-9634]]
** '''1''' reactions found over '''3''' reactions in the full pathway
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** 0 associated gene:
* [[PWY-5703]], urea degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5703 PWY-5703]
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** 1 reconstruction source(s) associated:
** '''2''' reactions found over '''2''' reactions in the full pathway
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
== Reconstruction information  ==
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* [[RXN3O-1803]]
* [[annotation]]:
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** 2 associated gene(s):
** [[pathwaytools]]:
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*** [[CHC_T00009465001_1]]
*** [[original_genome]]
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*** [[CHC_T00009465001]]
 +
** 3 reconstruction source(s) associated:
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*** [[annotation-original_genome]]
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*** [[orthology-arabidopsis_thaliana]]
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*** [[orthology-ectocarpus_siliculosus]]
 +
== Reaction(s) not found ==
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-9624 RXN-9624]
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* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5293 RXN3O-5293]
 +
* [http://metacyc.org/META/NEW-IMAGE?object=RXN3O-5304 RXN3O-5304]
 
== External links  ==
 
== External links  ==
* RHEA:
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{{#set: taxonomic range=TAX-4751}}
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19029 19029]
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{{#set: common name=stearate biosynthesis III (fungi)}}
* LIGAND-RXN:
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{{#set: common name=fatty acid biosynthesis|stearic acid biosynthesis|octadecanoate biosynthesis|saturated fatty acid biosynthesis}}
** [http://www.genome.jp/dbget-bin/www_bget?R00005 R00005]
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{{#set: reaction found=3}}
{{#set: direction=LEFT-TO-RIGHT}}
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{{#set: total reaction=6}}
{{#set: common name=allophanate hydrolase}}
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{{#set: completion rate=50.0}}
{{#set: ec number=EC-3.5.1.54}}
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{{#set: gene associated=CHC_T00009441001}}
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{{#set: in pathway=PWY-5169|PWY-5703}}
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{{#set: reconstruction category=annotation}}
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{{#set: reconstruction tool=pathwaytools}}
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{{#set: reconstruction source=original_genome}}
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Revision as of 15:04, 23 May 2018

Pathway PWY3O-355

  • taxonomic range:
  • common name:
    • stearate biosynthesis III (fungi)
  • Synonym(s):
    • fatty acid biosynthesis
    • stearic acid biosynthesis
    • octadecanoate biosynthesis
    • saturated fatty acid biosynthesis

Reaction(s) found

3 reactions found over 6 reactions in the full pathway

Reaction(s) not found

External links