Difference between revisions of "R621-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.12-RXN 3.1.26.12-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** ribonuclease E * ec...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R621-RXN R621-RXN] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/1....")
 
Line 1: Line 1:
 
[[Category:Reaction]]
 
[[Category:Reaction]]
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.26.12-RXN 3.1.26.12-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=R621-RXN R621-RXN] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
* common name:
 
** ribonuclease E
 
 
* ec number:
 
* ec number:
** [http://enzyme.expasy.org/EC/3.1.26.12 EC-3.1.26.12]
+
** [http://enzyme.expasy.org/EC/1.14.12.17 EC-1.14.12.17]
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 1 [[RNASE-E-DEGRADATION-SUBSTRATE-MRNA]][c] '''+''' n [[WATER]][c] '''=>''' n+1 [[mRNA-Fragments]][c]
+
** 1 [[NADH-P-OR-NOP]][c] '''+''' 2 [[NITRIC-OXIDE]][c] '''+''' 2 [[OXYGEN-MOLECULE]][c] '''=>''' 2 [[NITRATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[NAD-P-OR-NOP]][c]
 
* With common name(s):
 
* With common name(s):
** 1 RNase E degradation substrate mRNA[c] '''+''' n H2O[c] '''=>''' n+1 an mRNA fragment[c]
+
** 1 NAD(P)H[c] '''+''' 2 nitric oxide[c] '''+''' 2 oxygen[c] '''=>''' 2 nitrate[c] '''+''' 1 H+[c] '''+''' 1 NAD(P)+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* [[CHC_120]]
+
* Gene: [[CHC_T00008774001_1]]
** ORIGINAL_GENOME
+
** Source: [[orthology-galdieria.sulphuraria]]
***AUTOMATED-NAME-MATCH
+
* Gene: [[CHC_T00006886001_1]]
 +
** Source: [[orthology-galdieria.sulphuraria]]
 
== Pathways  ==
 
== Pathways  ==
 
== Reconstruction information  ==
 
== Reconstruction information  ==
* [[annotation]]:
+
* Category: [[orthology]]
** [[pathwaytools]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
*** [[original_genome]]
+
*** Tool: [[pantograph]]
 
== External links  ==
 
== External links  ==
 +
* LIGAND-RXN:
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05724 R05724]
 +
** [http://www.genome.jp/dbget-bin/www_bget?R05725 R05725]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
{{#set: common name=ribonuclease E}}
+
{{#set: ec number=EC-1.14.12.17}}
{{#set: ec number=EC-3.1.26.12}}
+
{{#set: gene associated=CHC_T00008774001_1|CHC_T00006886001_1}}
{{#set: gene associated=CHC_120}}
+
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
{{#set: reconstruction category=annotation}}
+
{{#set: reconstruction category=orthology}}
{{#set: reconstruction tool=pathwaytools}}
+
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
{{#set: reconstruction source=original_genome}}
+
{{#set: reconstruction tool=pantograph}}

Latest revision as of 15:04, 23 May 2018

Reaction R621-RXN

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links