Difference between revisions of "RXN-12457"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 2,3,4-saturated f...")
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12457 RXN-12457] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
 
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[[Category:Reaction]]
 
[[Category:Reaction]]
−
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=ACYLCOASYN-RXN ACYLCOASYN-RXN] ==
+
== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12457 RXN-12457] ==
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 2,3,4-saturated fatty acyl-CoA synthetase
 
−
** long-chain-fatty-acid-CoA ligase
 
 
* ec number:
 
* ec number:
−
** [http://enzyme.expasy.org/EC/6.2.1.3 EC-6.2.1.3]
+
** [http://enzyme.expasy.org/EC/1.3.1.89 EC-1.3.1.89]
 
* Synonym(s):
 
* Synonym(s):
−
** Acyl-activating enzyme
 
−
** Fatty acid thiokinase (long-chain)
 
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[CPD66-39]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[Saturated-Fatty-Acyl-CoA]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c]
+
** 1 [[PROTON]][c] '''+''' 1 [[Uracil47-in-tRNAs]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''=>''' 1 [[NAD-P-OR-NOP]][c] '''+''' 1 [[56-Dihydrouracil47-in-tRNAs]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 a 2,3,4-saturated fatty acid[c] '''+''' 1 ATP[c] '''+''' 1 coenzyme A[c] '''=>''' 1 a 2,3,4-saturated fatty acyl CoA[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c]
+
** 1 H+[c] '''+''' 1 a uracil47 in tRNA[c] '''+''' 1 NAD(P)H[c] '''=>''' 1 NAD(P)+[c] '''+''' 1 a 5,6-dihydrouracil47 in tRNA[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* [[CHC_T00008160001_1]]
+
* Gene: [[CHC_T00007932001_1]]
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
** Source: [[orthology-galdieria.sulphuraria]]
−
* [[CHC_T00008811001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00009428001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
−
* [[CHC_T00009428001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008500001_1]]
+
−
** [[pantograph]]-[[galdieria.sulphuraria]]
+
−
* [[CHC_T00008811001]]
+
−
** ORIGINAL_GENOME
+
−
***AUTOMATED-NAME-MATCH
+
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5136]], fatty acid β-oxidation II (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5136 PWY-5136]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-7288]], fatty acid β-oxidation (peroxisome, yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7288 PWY-7288]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
* [[FAO-PWY]], fatty acid β-oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=FAO-PWY FAO-PWY]
 
−
** '''7''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-391]], fatty acid β-oxidation VI (peroxisome): [http://metacyc.org/META/NEW-IMAGE?object=PWY66-391 PWY66-391]
 
−
** '''5''' reactions found over '''7''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
−
* [[orthology]]:
+
* Category: [[orthology]]
−
** [[pantograph]]:
+
** Source: [[orthology-galdieria.sulphuraria]]
−
*** [[galdieria.sulphuraria]]
+
*** Tool: [[pantograph]]
−
* [[annotation]]:
+
−
** [[pathwaytools]]:
+
−
*** [[original_genome]]
+
 
== External links  ==
 
== External links  ==
−
* UNIPROT:
 
−
** [http://www.uniprot.org/uniprot/P18163 P18163]
 
−
** [http://www.uniprot.org/uniprot/P39518 P39518]
 
−
** [http://www.uniprot.org/uniprot/O51162 O51162]
 
−
** [http://www.uniprot.org/uniprot/P39002 P39002]
 
−
** [http://www.uniprot.org/uniprot/Q9RYK3 Q9RYK3]
 
−
** [http://www.uniprot.org/uniprot/Q10776 Q10776]
 
−
** [http://www.uniprot.org/uniprot/O83181 O83181]
 
−
** [http://www.uniprot.org/uniprot/Q9RTR4 Q9RTR4]
 
−
** [http://www.uniprot.org/uniprot/P94547 P94547]
 
−
** [http://www.uniprot.org/uniprot/Q9YCF0 Q9YCF0]
 
−
** [http://www.uniprot.org/uniprot/Q9CHR0 Q9CHR0]
 
−
** [http://www.uniprot.org/uniprot/Q9JTK0 Q9JTK0]
 
−
** [http://www.uniprot.org/uniprot/P44446 P44446]
 
−
** [http://www.uniprot.org/uniprot/O30039 O30039]
 
−
** [http://www.uniprot.org/uniprot/O51539 O51539]
 
−
** [http://www.uniprot.org/uniprot/Q9JYJ7 Q9JYJ7]
 
−
** [http://www.uniprot.org/uniprot/P33121 P33121]
 
−
** [http://www.uniprot.org/uniprot/P33124 P33124]
 
−
** [http://www.uniprot.org/uniprot/P30624 P30624]
 
−
** [http://www.uniprot.org/uniprot/Q02602 Q02602]
 
−
** [http://www.uniprot.org/uniprot/P69451 P69451]
 
−
** [http://www.uniprot.org/uniprot/P69452 P69452]
 
−
** [http://www.uniprot.org/uniprot/Q8JZR0 Q8JZR0]
 
−
** [http://www.uniprot.org/uniprot/P47912 P47912]
 
−
** [http://www.uniprot.org/uniprot/P73004 P73004]
 
−
** [http://www.uniprot.org/uniprot/O81614 O81614]
 
−
** [http://www.uniprot.org/uniprot/O15840 O15840]
 
−
** [http://www.uniprot.org/uniprot/Q96537 Q96537]
 
−
** [http://www.uniprot.org/uniprot/Q96538 Q96538]
 
−
** [http://www.uniprot.org/uniprot/Q96338 Q96338]
 
−
** [http://www.uniprot.org/uniprot/Q9T009 Q9T009]
 
−
** [http://www.uniprot.org/uniprot/Q9T0A0 Q9T0A0]
 
−
** [http://www.uniprot.org/uniprot/Q9ZBW6 Q9ZBW6]
 
−
** [http://www.uniprot.org/uniprot/Q9X7Y5 Q9X7Y5]
 
−
** [http://www.uniprot.org/uniprot/Q9X7Z0 Q9X7Z0]
 
−
** [http://www.uniprot.org/uniprot/O60135 O60135]
 
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=2,3,4-saturated fatty acyl-CoA synthetase}}
+
{{#set: ec number=EC-1.3.1.89}}
−
{{#set: common name=long-chain-fatty-acid-CoA ligase}}
+
{{#set: gene associated=CHC_T00007932001_1}}
−
{{#set: ec number=EC-6.2.1.3}}
+
{{#set: in pathway=}}
−
{{#set: common name=Acyl-activating enzyme|Fatty acid thiokinase (long-chain)}}
+
−
{{#set: gene associated=CHC_T00008160001_1|CHC_T00008811001_1|CHC_T00009428001|CHC_T00009428001_1|CHC_T00008500001_1|CHC_T00008811001}}
+
−
{{#set: in pathway=PWY-5136|PWY-7288|FAO-PWY|PWY66-391}}
+
 
{{#set: reconstruction category=orthology}}
 
{{#set: reconstruction category=orthology}}
 +
{{#set: reconstruction source=orthology-galdieria.sulphuraria}}
 
{{#set: reconstruction tool=pantograph}}
 
{{#set: reconstruction tool=pantograph}}
−
{{#set: reconstruction source=galdieria.sulphuraria}}
 
−
{{#set: reconstruction category=annotation}}
 
−
{{#set: reconstruction tool=pathwaytools}}
 
−
{{#set: reconstruction source=original_genome}}
 

Latest revision as of 16:06, 23 May 2018

Reaction RXN-12457

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/ccrgem/index.php?title=RXN-12457&oldid=13252"