Difference between revisions of "PSERTRANSAMPYR-RXN"
From metabolic_network
(Created page with "Category:Gene == Gene CHC_1120 == * left end position: ** 172420 * transcription direction: ** NEGATIVE * right end position: ** 173211 * common name: ** trpA * centisome...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == * direction: ** REVERSIBLE * common name: ** phosphoserin...") |
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| Line 1: | Line 1: | ||
| − | [[Category: | + | [[Category:Reaction]] |
| − | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PSERTRANSAMPYR-RXN PSERTRANSAMPYR-RXN] == |
| − | * | + | * direction: |
| − | + | ** REVERSIBLE | |
| − | + | ||
| − | ** | + | |
| − | + | ||
| − | + | ||
* common name: | * common name: | ||
| − | ** | + | ** phosphoserine aminotransferase |
| − | * | + | * ec number: |
| − | ** | + | ** [http://enzyme.expasy.org/EC/2.6.1.52 EC-2.6.1.52] |
* Synonym(s): | * Synonym(s): | ||
| − | == | + | == Reaction Formula == |
| − | * [[ | + | * With identifiers: |
| − | * | + | ** 1 [[3OH-4P-OH-ALPHA-KETOBUTYRATE]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[4-PHOSPHONOOXY-THREONINE]][c] |
| − | ** | + | * With common name(s): |
| − | * [[ | + | ** 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 2-oxoglutarate[c] '''+''' 1 4-phospho-hydroxy-L-threonine[c] |
| − | ** original_genome | + | |
| − | *** | + | == Genes associated with this reaction == |
| − | * [[ | + | Genes have been associated with this reaction based on different elements listed below. |
| − | ** | + | * Gene: [[CHC_T00009221001]] |
| − | *** | + | ** Source: [[annotation-original_genome]] |
| − | == Pathways | + | *** Assignment: AUTOMATED-NAME-MATCH |
| − | * [[ | + | * Gene: [[CHC_T00000094001_1]] |
| − | * [[ | + | ** Source: [[orthology-arabidopsis_thaliana]] |
| + | * Gene: [[CHC_T00009221001_1]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | == Pathways == | ||
| + | * [[PYRIDOXSYN-PWY]], pyridoxal 5'-phosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PYRIDOXSYN-PWY PYRIDOXSYN-PWY] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | == Reconstruction information == | ||
| + | * Category: [[orthology]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-galdieria.sulphuraria]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | * Category: [[annotation]] | ||
| + | ** Source: [[annotation-original_genome]] | ||
| + | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| − | {{#set: | + | * RHEA: |
| − | {{#set: | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16573 16573] |
| − | {{#set: | + | * LIGAND-RXN: |
| − | {{#set: | + | ** [http://www.genome.jp/dbget-bin/www_bget?R05085 R05085] |
| − | {{#set: | + | {{#set: direction=REVERSIBLE}} |
| − | {{#set: | + | {{#set: common name=phosphoserine aminotransferase}} |
| − | {{#set: | + | {{#set: ec number=EC-2.6.1.52}} |
| + | {{#set: gene associated=CHC_T00009221001|CHC_T00000094001_1|CHC_T00009221001_1}} | ||
| + | {{#set: in pathway=PYRIDOXSYN-PWY}} | ||
| + | {{#set: reconstruction category=orthology|annotation}} | ||
| + | {{#set: reconstruction source=annotation-original_genome|orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-galdieria.sulphuraria}} | ||
| + | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Revision as of 15:08, 23 May 2018
Contents
Reaction PSERTRANSAMPYR-RXN
- direction:
- REVERSIBLE
- common name:
- phosphoserine aminotransferase
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3OH-4P-OH-ALPHA-KETOBUTYRATE[c] + 1 GLT[c] <=> 1 2-KETOGLUTARATE[c] + 1 4-PHOSPHONOOXY-THREONINE[c]
- With common name(s):
- 1 (3R)-3-hydroxy-2-oxo-4 phosphonooxybutanoate[c] + 1 L-glutamate[c] <=> 1 2-oxoglutarate[c] + 1 4-phospho-hydroxy-L-threonine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: CHC_T00009221001
- Source: annotation-original_genome
- Assignment: AUTOMATED-NAME-MATCH
- Source: annotation-original_genome
- Gene: CHC_T00000094001_1
- Source: orthology-arabidopsis_thaliana
- Gene: CHC_T00009221001_1
- Source: orthology-galdieria.sulphuraria
- Source: orthology-ectocarpus_siliculosus
Pathways
- PYRIDOXSYN-PWY, pyridoxal 5'-phosphate biosynthesis I: PYRIDOXSYN-PWY
- 3 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-galdieria.sulphuraria
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-original_genome
- Tool: pathwaytools
- Source: annotation-original_genome
External links
