Difference between revisions of "SQUALENE-MONOOXYGENASE-RXN"
From metabolic_network
(Created page with "Category:Metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD3O-4151 CPD3O-4151] == * smiles: ** C1(C(=CC=C(C=1)O)CCO) * inchi key: ** InChIKey=YCCILVSKP...") |
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == * direction: ** LEFT-TO-RIGHT * ec number...") |
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− | [[Category: | + | [[Category:Reaction]] |
− | == | + | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=SQUALENE-MONOOXYGENASE-RXN SQUALENE-MONOOXYGENASE-RXN] == |
− | * | + | * direction: |
− | ** | + | ** LEFT-TO-RIGHT |
− | + | * ec number: | |
− | + | ** [http://enzyme.expasy.org/EC/1.14.14.17 EC-1.14.14.17] | |
− | * | + | |
− | ** | + | |
− | + | ||
− | + | ||
* Synonym(s): | * Synonym(s): | ||
− | |||
− | |||
− | == Reaction(s) | + | == Reaction Formula == |
− | == | + | * With identifiers: |
− | * [[ | + | ** 1 [[Red-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[SQUALENE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[Ox-NADPH-Hemoprotein-Reductases]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[EPOXYSQUALENE]][c] |
− | == | + | * With common name(s): |
+ | ** 1 a reduced [NADPH-hemoprotein reductase][c] '''+''' 1 squalene[c] '''+''' 1 oxygen[c] '''=>''' 1 an oxidized [NADPH-hemoprotein reductase][c] '''+''' 1 H2O[c] '''+''' 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c] | ||
+ | |||
+ | == Genes associated with this reaction == | ||
+ | Genes have been associated with this reaction based on different elements listed below. | ||
+ | * Gene: [[scaffold20_461442_460650]] | ||
+ | ** Source: [[manual-pathmodel_inference]] | ||
+ | * Gene: [[Scaffold90_7511_6165]] | ||
+ | ** Source: [[manual-pathmodel_inference]] | ||
+ | * Gene: [[scaffold57_152407_364140]] | ||
+ | ** Source: [[manual-pathmodel_inference]] | ||
+ | == Pathways == | ||
+ | * [[PWY-5670]], epoxysqualene biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5670 PWY-5670] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-6098]], diploterol and cycloartenol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6098 PWY-6098] | ||
+ | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
+ | == Reconstruction information == | ||
+ | * Category: [[manual]] | ||
+ | ** Source: [[manual-pathmodel_inference]] | ||
+ | *** Comment: [[tblastn plus rnaseq evidence]] | ||
== External links == | == External links == | ||
− | * | + | * LIGAND-RXN: |
− | ** [http:// | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02873 R02873] |
− | + | ** [http://www.genome.jp/dbget-bin/www_bget?R02874 R02874] | |
− | + | * UNIPROT: | |
− | ** [http://www.genome.jp/dbget-bin/www_bget? | + | ** [http://www.uniprot.org/uniprot/P52020 P52020] |
− | * | + | ** [http://www.uniprot.org/uniprot/P32476 P32476] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/Q9T064 Q9T064] |
− | * | + | ** [http://www.uniprot.org/uniprot/O65829 O65829] |
− | ** [http://www. | + | ** [http://www.uniprot.org/uniprot/O65726 O65726] |
− | * | + | ** [http://www.uniprot.org/uniprot/O65727 O65727] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O65402 O65402] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O65403 O65403] |
− | {{#set: | + | ** [http://www.uniprot.org/uniprot/O65404 O65404] |
− | {{#set: | + | {{#set: direction=LEFT-TO-RIGHT}} |
− | {{#set: | + | {{#set: ec number=EC-1.14.14.17}} |
− | {{#set: | + | {{#set: gene associated=scaffold20_461442_460650|Scaffold90_7511_6165|scaffold57_152407_364140}} |
+ | {{#set: in pathway=PWY-5670|PWY-6098}} | ||
+ | {{#set: reconstruction category=manual}} | ||
+ | {{#set: reconstruction source=manual-pathmodel_inference}} | ||
+ | {{#set: reconstruction comment=tblastn plus rnaseq evidence}} |
Revision as of 15:12, 23 May 2018
Contents
Reaction SQUALENE-MONOOXYGENASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Red-NADPH-Hemoprotein-Reductases[c] + 1 SQUALENE[c] + 1 OXYGEN-MOLECULE[c] => 1 Ox-NADPH-Hemoprotein-Reductases[c] + 1 WATER[c] + 1 EPOXYSQUALENE[c]
- With common name(s):
- 1 a reduced [NADPH-hemoprotein reductase][c] + 1 squalene[c] + 1 oxygen[c] => 1 an oxidized [NADPH-hemoprotein reductase][c] + 1 H2O[c] + 1 (3S)-2,3-epoxy-2,3-dihydrosqualene[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: scaffold20_461442_460650
- Source: manual-pathmodel_inference
- Gene: Scaffold90_7511_6165
- Source: manual-pathmodel_inference
- Gene: scaffold57_152407_364140
- Source: manual-pathmodel_inference
Pathways
- PWY-5670, epoxysqualene biosynthesis: PWY-5670
- 2 reactions found over 2 reactions in the full pathway
- PWY-6098, diploterol and cycloartenol biosynthesis: PWY-6098
- 2 reactions found over 4 reactions in the full pathway
Reconstruction information
- Category: manual
- Source: manual-pathmodel_inference
- Comment: tblastn plus rnaseq evidence
- Source: manual-pathmodel_inference
External links