Difference between revisions of "PWY-5434"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/...")
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5434 PWY-5434] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-3...")
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[[Category:Reaction]]
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[[Category:Pathway]]
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10699 RXN-10699] ==
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== Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-5434 PWY-5434] ==
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* direction:
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* taxonomic range:
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** LEFT-TO-RIGHT
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** [http://metacyc.org/META/NEW-IMAGE?object=TAX-33090 TAX-33090]
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* ec number:
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* common name:
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** [http://enzyme.expasy.org/EC/2.3.1.16 EC-2.3.1.16]
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** (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis
 
* Synonym(s):
 
* Synonym(s):
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** nerolidol biosynthesis
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** 4,8-dimethyl-1,3(E),7-nonatriene biosynthesis
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** DMNT biosynthesis
  
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== Reaction Formula ==
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== Reaction(s) found ==
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* With identifiers:
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'''4''' reactions found over '''4''' reactions in the full pathway
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** 1 [[CPD-11520]][c] '''+''' 1 [[CO-A]][c] '''=>''' 1 [[ACETYL-COA]][c] '''+''' 1 [[CPD-11521]][c]
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* [[RXN-11575]]
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* With common name(s):
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** 0 associated gene:
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** 1 OPC8-3-ketoacyl-CoA[c] '''+''' 1 coenzyme A[c] '''=>''' 1 acetyl-CoA[c] '''+''' 1 OPC6-CoA[c]
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** 1 reconstruction source(s) associated:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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== Genes associated with this reaction  ==
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* [[RXN-11911]]
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Genes have been associated with this reaction based on different elements listed below.
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** 0 associated gene:
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* [[CHC_T00009422001_1]]
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** 1 reconstruction source(s) associated:
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** [[pantograph]]-[[galdieria.sulphuraria]]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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* [[CHC_T00009349001_1]]
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* [[RXN-8616]]
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** [[pantograph]]-[[galdieria.sulphuraria]]
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** 0 associated gene:
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== Pathways  ==
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** 1 reconstruction source(s) associated:
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* [[PWY-735]], jasmonic acid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-735 PWY-735]
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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** '''13''' reactions found over '''19''' reactions in the full pathway
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* [[RXN-8619]]
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== Reconstruction information  ==
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** 0 associated gene:
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* [[orthology]]:
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** 1 reconstruction source(s) associated:
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** [[pantograph]]:
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*** [[gap-filling-gapfilling_solution_with_meneco_draft_medium]]
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*** [[galdieria.sulphuraria]]
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== Reaction(s) not found ==
 
== External links  ==
 
== External links  ==
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{{#set: direction=LEFT-TO-RIGHT}}
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* PLANTCYC : PWY-5434
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{{#set: ec number=EC-2.3.1.16}}
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{{#set: taxonomic range=TAX-33090}}
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{{#set: gene associated=CHC_T00009422001_1|CHC_T00009349001_1}}
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{{#set: common name=(3E)-4,8-dimethylnona-1,3,7-triene biosynthesis}}
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{{#set: in pathway=PWY-735}}
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{{#set: common name=nerolidol biosynthesis|4,8-dimethyl-1,3(E),7-nonatriene biosynthesis|DMNT biosynthesis}}
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{{#set: reconstruction category=orthology}}
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{{#set: reaction found=4}}
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{{#set: reconstruction tool=pantograph}}
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{{#set: total reaction=4}}
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{{#set: reconstruction source=galdieria.sulphuraria}}
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{{#set: completion rate=100.0}}

Revision as of 15:26, 23 May 2018

Pathway PWY-5434

  • taxonomic range:
  • common name:
    • (3E)-4,8-dimethylnona-1,3,7-triene biosynthesis
  • Synonym(s):
    • nerolidol biosynthesis
    • 4,8-dimethyl-1,3(E),7-nonatriene biosynthesis
    • DMNT biosynthesis

Reaction(s) found

4 reactions found over 4 reactions in the full pathway

Reaction(s) not found

External links

  • PLANTCYC : PWY-5434




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